RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 MAP3K3Q99759 626 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TMEM43Q9BTV4 400 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 ABHD6Q9BV23 337 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 HDAC8Q9BY41 377 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 CACFD1Q9UGQ2 172 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SNX11Q9Y5W9 270 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 MN1Q10571 1320 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 COL11A2P13942 1736 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SBK2P0C263 348 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 MGST1P10620 155 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 LIPCP11150 499 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TIMP2P16035 220 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 HCCSP53701 268 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 RAB38P57729 211 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 FAM162BQ5T6X4 162 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 UBXN10Q96LJ8 280 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SYT11Q9BT88 431 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SEMA6CQ9H3T2 930 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 NOX4Q9NPH5 578 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 ACAD8Q9UKU7 415 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 PCDHGA1Q9Y5H4 931 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TRAV36DV7A0A075B6V5 113 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 LRRC30A6NM36 301 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 C4orf47A7E2U8 309 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 KDM4EB2RXH2 506 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 CALCBP10092 127 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SNRPBP14678 240 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF93P35789 620 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 MOB3CQ70IA8 216 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SECTM1Q8WVN6 248 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SHISA4Q96DD7 197 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 BSCL2Q96G97 398 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 STACQ99469 402 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SORBS1Q9BX66 1292 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 DYSFO75923 2080 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 HSPB2A8KAH6 182 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 PRSS44E7EML9 344 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 BET1O15155 118 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TO15178 435 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 FBXO45P0C2W1 286 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 ATXN1LP0C7T5 689 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 FCGR2AP12318 317 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TGM1P22735 817 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 FKBP2P26885 142 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 DPP4P27487 766 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SLC7A9P82251 487 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 HSPB2Q16082 182 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 HNRNPA1L2Q32P51 320 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 CLLU1OSQ5K130 101 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 PIANPQ8IYJ0 282 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TMEM102Q8N9M5 508 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 NGBQ9NPG2 151 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 VDAC3Q9Y277 283 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 STRAPQ9Y3F4 350 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 UMAD1C9J7I0 102 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 J3KTA2 159 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SELEP16581 610 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 VIPR2P41587 438 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SSR4P51571 173 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 Q6ZTK2 550 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SLC46A3Q7Z3Q1 461 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SIGLECL1Q8N7X8 197 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 OR52E1Q8NGJ3 308 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 INTS12Q96CB8 462 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SLC46A1Q96NT5 459 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 APOOQ9BUR5 198 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 KLF16Q9BXK1 252 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 MOB1AQ9H8S9 216 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 PATZ1Q9HBE1 687 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 IL17CQ9P0M4 197 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 MRPS28Q9Y2Q9 187 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 FNDC1Q4ZHG4 1894 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 I6L893 689 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 DVL1O14640 695 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TGOLN2O43493 480 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 DVL1P1P54792 670 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 SEC61A1P61619 476 aaKnown RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 DOC2BQ14184 412 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 ADIRFQ15847 76 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 GTDC1Q4AE62 458 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 YOD1Q5VVQ6 348 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 LIPIQ6XZB0 460 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 Q6ZNX1 250 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 GDF7Q7Z4P5 450 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 CMTM2Q8TAZ6 248 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 CLSTN3Q9BQT9 956 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 NUDT9Q9BW91 350 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 OR51B6Q9H340 312 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 EPHX3Q9H6B9 360 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 LYRM4Q9HD34 91 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 KPTNQ9Y664 436 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TMEM72A0PK05 275 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 TMEM189-UBE2V1I3L0A0 370 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 PHF1O43189 567 aaPredicted RBP4.44□□□□□ -1.7
RC3H1-201ENST00000258349 MBP02144 154 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 DBHP09172 617 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 RAB1AP62820 205 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 PHYHD1Q5SRE7 291 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 MANEAQ5SRI9 462 aa4.44□□□□□ -1.7
RC3H1-201ENST00000258349 UQCC3Q6UW78 93 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms