RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ALG11Q2TAA5 492 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 TMEM52BQ4KMG9 183 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 LINC01590Q5TEZ4 76 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 ZCCHC12Q6PEW1 402 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 UNQ6126/PRO20091Q6UXV3 157 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 LINC00114Q6XXX2 140 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 SLC39A5Q6ZMH5 540 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 SLC16A13Q7RTY0 426 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 MISPQ8IVT2 679 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 SLC30A7Q8NEW0 376 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 OR2L3Q8NG85 312 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 ING5Q8WYH8 240 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 GAL3ST3Q96A11 431 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 TMEM106AQ96A25 262 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 SEC22AQ96IW7 307 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 ADAD1Q96M93 576 aaKnown RBP10.46□□□□□ -0.74
TROAP-201ENST00000257909 OR51M1Q9H341 326 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 MKKSQ9NPJ1 570 aaPredicted RBP10.46□□□□□ -0.74
TROAP-201ENST00000257909 POLE3Q9NRF9 147 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 MRM2Q9UI43 246 aaKnown RBP10.46□□□□□ -0.74
TROAP-201ENST00000257909 PDE4DIPQ5VU43 2346 aa10.46□□□□□ -0.74
TROAP-201ENST00000257909 A0A087WV48 116 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 C5orf52A6NGY3 159 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 TMEM212A6NML5 194 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 C1QTNF3-AMACRE9PGA6 284 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 SCAMP1O15126 338 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 GATCO43716 136 aaKnown RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 F12P00748 615 aaPredicted RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 PTAFRP25105 342 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 DDX6P26196 483 aaKnown RBP eCLIP10.45□□□□□ -0.74
TROAP-201ENST00000257909 SRSF3P84103 164 aaKnown RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 PLAURQ03405 335 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 PJVKQ0ZLH3 352 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 HABP2Q14520 560 aaPredicted RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 MLF2Q15773 248 aaPredicted RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 RAB11BQ15907 218 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 PNLIPRP3Q17RR3 467 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 C2orf76Q3KRA6 126 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 PLEKHN1Q494U1 663 aaPredicted RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 TRMT12Q53H54 448 aaKnown RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 ARHGAP40Q5TG30 622 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 USP53Q70EK8 1073 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 BAP18Q8IXM2 172 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 SLC39A11Q8N1S5 342 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 ZSCAN1Q8NBB4 408 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 FAM3DQ96BQ1 224 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 ZNF558Q96NG5 402 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 PTCHD1Q96NR3 888 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 INSM2Q96T92 566 aaPredicted RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 ATG5Q9H1Y0 275 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 NIT2Q9NQR4 276 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 FBXO4Q9UKT5 387 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 TMEM72A0PK05 275 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 OR2W5A6NFC9 320 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 COLCA2A8K830 154 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 C1orf196B1AJZ1 125 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 CCSO14618 274 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 LDB3O75112 727 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 CYB5AP00167 134 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 CD74P04233 296 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 CPMP14384 443 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 AIMP2Q13155 320 aaKnown RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 NR0B2Q15466 257 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 FHL5Q5TD97 284 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 FIGNL1Q6PIW4 674 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 DRAM2Q6UX65 266 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 LYG2Q86SG7 212 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 GALNT16Q8N428 558 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 ZNF676Q8N7Q3 588 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 C15orf54Q8N8G6 183 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 OR4A4PQ8NGN8 299 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 MCHR2Q969V1 340 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 SEH1LQ96EE3 360 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 GPR174Q9BXC1 333 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 TINAGL1Q9GZM7 467 aaPredicted RBP10.45□□□□□ -0.74
TROAP-201ENST00000257909 SMCO4Q9NRQ5 59 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 PLEKHA6Q9Y2H5 1048 aa10.45□□□□□ -0.74
TROAP-201ENST00000257909 A0A087WV62 115 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 OR4C45A6NMZ5 311 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 SLC17A2O00624 439 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 EIF1AYO14602 144 aaKnown RBP10.44□□□□□ -0.74
TROAP-201ENST00000257909 ZNF208O43345 1280 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 PRICKLE3O43900 615 aaPredicted RBP10.44□□□□□ -0.74
TROAP-201ENST00000257909 ABHD16AO95870 558 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 CMPK1P30085 196 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 TLX1P31314 330 aaPredicted RBP10.44□□□□□ -0.74
TROAP-201ENST00000257909 EIF1AXP47813 144 aaKnown RBP10.44□□□□□ -0.74
TROAP-201ENST00000257909 CDK3Q00526 305 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 ULK3Q6PHR2 472 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 C5orf46Q6UWT4 87 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 DBX2Q6ZNG2 339 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 BPIFB2Q8N4F0 458 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 OR4K17Q8NGC6 315 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 ZPLD1Q8TCW7 415 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 OR8D1Q8WZ84 308 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 ARSGQ96EG1 525 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 PHB2Q99623 299 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 EGLN1Q9GZT9 426 aa10.44□□□□□ -0.74
TROAP-201ENST00000257909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.44□□□□□ -0.74
TROAP-201ENST00000257909 RCC2Q9P258 522 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms