RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 RBMS2Q15434 407 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 FAM69BQ5VUD6 431 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NHLRC1Q6VVB1 395 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RSC1A1Q92681 617 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 FAM3DQ96BQ1 224 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TOE1Q96GM8 510 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 WFDC6Q9BQY6 131 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SELENOIQ9C0D9 397 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NARFLQ9H6Q4 476 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ALKBH4Q9NXW9 302 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TRPM7Q96QT4 1865 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.22□□□□□ -1.733e-10■■■■□ 21.5
VPS13C-201ENST00000249837 LINC01553A4QN01 128 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 FADS1O60427 444 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SLC26A5P58743 744 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 Q499Y3 187 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GLYR1Q49A26 553 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 LCN10Q6JVE6 187 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM184AQ6ZMB5 413 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 PRSS41Q7RTY9 318 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 HHIPL1Q96JK4 782 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RBM24Q9BX46 236 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 OR11A1Q9GZK7 315 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 KIR3DX1Q9H7L2 352 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ACKR4Q9NPB9 350 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MEPEQ9NQ76 525 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SERTM1A2A2V5 107 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CT62P0C5K7 136 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GUCA2AQ02747 115 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 DEFB133Q30KQ1 61 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 OVCH1Q7RTY7 1134 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 OR6M1Q8NGM8 313 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 C3orf49Q96BT1 292 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 IL20Q9NYY1 176 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 V9GYH0 126 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 A6NIZ1 184 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF264O43296 627 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GPANK1O95872 356 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GLP1RP43220 463 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 AKR1C2P52895 323 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RAP1BP61224 184 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RAP1AP62834 184 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MRPS10P82664 201 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 AKR1C1Q04828 323 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GLYATL3Q5SZD4 288 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 UEVLDQ8IX04 471 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CA13Q8N1Q1 262 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 OR4C16Q8NGL9 310 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SLC37A2Q8TED4 501 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MARVELD1Q9BSK0 173 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 EMC6Q9BV81 110 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CD207Q9UJ71 328 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MN1Q10571 1320 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 USF3Q68DE3 2245 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CCNOP22674 350 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 DUSP2Q05923 314 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CAMK2DQ13557 499 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 KRBOX4Q5JUW0 171 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 C17orf47Q8NEP4 570 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 STK35Q8TDR2 534 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ERVMER34-1Q9H9K5 563 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TNS1Q9HBL0 1735 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 P2RX6O15547 441 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RGS11O94810 467 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SLC35E2P0CK97 266 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NFYAP23511 347 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 FGF9P31371 208 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 LINC01555Q8NAE3 123 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TOMM40LQ969M1 308 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 WDR89Q96FK6 387 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GSX2Q9BZM3 304 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NXF2Q9GZY0 626 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CCDC86Q9H6F5 360 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SLCO1C1Q9NYB5 712 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TAS2R5Q9NYW4 299 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 HHLA2Q9UM44 414 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ENTPD2Q9Y5L3 495 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TSC2P49815 1807 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM269A0A1B0GVZ9 245 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 IFITM5A6NNB3 132 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SULT1B1O43704 296 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 BDKRB2P30411 391 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CAMLGP49069 296 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 PPP2CBP62714 309 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 PPP2CAP67775 309 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ALKBH1Q13686 389 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MORN4Q8NDC4 146 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SMIM19Q96E16 107 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 PELI1Q96FA3 418 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF587Q96SQ5 575 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MRPS17Q9Y2R5 130 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NCOA6Q14686 2063 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 AIPO00170 330 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GMDSO60547 372 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 LCATP04180 440 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 IFNGR1P15260 489 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TNFRSF4P43489 277 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 EXOSC2Q13868 293 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MELKQ14680 651 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 OR13C9Q8NGT0 318 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms