RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 OMA1Q96E52 524 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 OR14A2Q96R54 314 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 COQ7Q99807 217 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PALMDQ9NP74 551 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PRDM9Q9NQV7 894 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 CCDC182A6NF36 153 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GP1BBP13224 206 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 SNRPBP14678 240 aaKnown RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PRKCAP17252 672 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 TNFSF10P50591 281 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PSMD4P55036 377 aaKnown RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 SLC37A1P57057 533 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 CD83Q01151 205 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 LGALS3BPQ08380 585 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 CBX3Q13185 183 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GLYR1Q49A26 553 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 AKAP14Q86UN6 197 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PLPP5Q8NEB5 264 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 AP3S1Q92572 193 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 SLC25A46Q96AG3 418 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF524Q96C55 264 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PSD2Q9BQI7 771 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 HES7Q9BYE0 225 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 ANKRD19PQ9H560 264 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF223Q9UK11 482 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PCSK5Q92824 1860 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 LOC102723996A0A087X1L8 192 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 TMEM129A0AVI4 362 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GBX2P52951 348 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PSPHP78330 225 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 FGFBP1Q14512 234 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 OR1C1Q15619 314 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF766Q5HY98 468 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 ARHGAP11AQ6P4F7 1023 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 TUBA3EQ6PEY2 450 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GFRALQ6UXV0 394 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 GALNTL5Q7Z4T8 443 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 SLC35F2Q8IXU6 374 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 HSD17B8Q92506 261 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 CENPMQ9NSP4 180 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 CCDC59Q9P031 241 aaKnown RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 LRFN1Q9P244 771 aa7.8□□□□□ -1.16
VPS4B-201ENST00000238497 MRTO4Q9UKD2 239 aaKnown RBP7.8□□□□□ -1.16
VPS4B-201ENST00000238497 PCNX3Q9H6A9 2034 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 TRGV8A0A0C4DH27 118 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 DCTN6O00399 190 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ATP6V1G1O75348 118 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 SPARCP09486 303 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 CD46P15529 392 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 SFTPDP35247 375 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 RFC3P40938 356 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 CDKN2AP42771 156 aaKnown RBP7.79□□□□□ -1.16
VPS4B-201ENST00000238497 MAGEA8P43361 318 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 MEP1BQ16820 701 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF181Q2M3W8 571 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 SLC25A35Q3KQZ1 300 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 CARD17Q5XLA6 110 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 TMPRSS11FQ6ZWK6 438 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 PM20D2Q8IYS1 436 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF615Q8N8J6 731 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ABHD4Q8TB40 342 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 DNAJA4Q8WW22 397 aaPredicted RBP7.79□□□□□ -1.16
VPS4B-201ENST00000238497 CNN2Q99439 309 aaKnown RBP7.79□□□□□ -1.16
VPS4B-201ENST00000238497 EMC6Q9BV81 110 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 KCNN2Q9H2S1 579 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 FGF20Q9NP95 211 aaPredicted RBP7.79□□□□□ -1.16
VPS4B-201ENST00000238497 B3GAT2Q9NPZ5 323 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 NTMQ9P121 344 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 PLEKHB1Q9UF11 243 aaPredicted RBP7.79□□□□□ -1.16
VPS4B-201ENST00000238497 BOLA1Q9Y3E2 137 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 TRAV6A0A075B6T7 132 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 A0A0G2JMP0 313 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 A0A0X1KG70 313 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 EEF1E1O43324 174 aaKnown RBP7.79□□□□□ -1.16
VPS4B-201ENST00000238497 MAS1P04201 325 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 PTHLHP12272 177 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 GDI2P50395 445 aaKnown RBP7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF117Q03924 483 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 TPBGQ13641 420 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ETFDHQ16134 617 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 HIST2H2BCQ6DN03 193 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 WBP2NLQ6ICG8 309 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 PLET1Q6UQ28 207 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 PAMR1Q6UXH9 720 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 PRSS45Q7RTY3 260 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 FJX1Q86VR8 437 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ZNF676Q8N7Q3 588 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 OR4M2Q8NGB6 313 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 NSMAFQ92636 917 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 HAS2Q92819 552 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 TAAR8Q969N4 342 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 ALG12Q9BV10 488 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 LAMP5Q9UJQ1 280 aa7.79□□□□□ -1.16
VPS4B-201ENST00000238497 A0A087WUJ7 227 aa7.78□□□□□ -1.16
VPS4B-201ENST00000238497 NPIPA5E9PKD4 350 aa7.78□□□□□ -1.16
VPS4B-201ENST00000238497 SLC16A7O60669 478 aa7.78□□□□□ -1.16
VPS4B-201ENST00000238497 FMO6PO60774 539 aa7.78□□□□□ -1.16
VPS4B-201ENST00000238497 RGS9O75916 674 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms