RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PLK3Q9H4B4 646 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 IKZF5Q9H5V7 419 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 C19orf12Q9NSK7 152 aa12.52□□□□□ -0.4
TGFBR3-201ENST00000212355 SLC5A10A0PJK1 596 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 ANKRD34BA5PLL1 514 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 SDCBPO00560 298 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 MPP7Q5T2T1 576 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 DLEU7Q6UYE1 221 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 SYT13Q7L8C5 426 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 CADM3Q8N126 398 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 CHTF18Q8WVB6 975 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 FAM3DQ96BQ1 224 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 INTS12Q96CB8 462 aaKnown RBP12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 GIMAP5Q96F15 307 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC19A3Q9BZV2 496 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 OR11A1Q9GZK7 315 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 TMEM184BQ9Y519 407 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 OR2A25A4D2G3 310 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 HTR1FP30939 366 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 ZNF93P35789 620 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 C2orf76Q3KRA6 126 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 HBMQ6B0K9 141 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 UNKLQ9H9P5 680 aaKnown RBP12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 STEAP1Q9UHE8 339 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 SCML1Q9UN30 329 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 TMEM212A6NML5 194 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 ZNF701M0R085 212 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 RAD52P43351 418 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 HTR3AP46098 478 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 ZNF439Q8NDP4 499 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 KCNJ15Q99712 375 aa12.52□□□□□ -0.41
TGFBR3-201ENST00000212355 NXPH2O95156 264 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DPP4P27487 766 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 SSR4P51571 173 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 RPS16P62249 146 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DUSP2Q05923 314 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 FAPQ12884 760 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC10A1Q14973 349 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 C22orf15Q8WYQ4 148 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 PDLIM5Q96HC4 596 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DEFB127Q9H1M4 99 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 C6orf106Q9H6K1 298 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 GAREM1Q9H706 876 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 TMEM30AQ9NV96 361 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 TIAM2Q8IVF5 1701 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 MCRIP1C9JLW8 97 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 XRCC3O43542 346 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 PSMB1P20618 241 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 ADIRFQ15847 76 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 OR52B4Q8NGK2 314 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 STT3BQ8TCJ2 826 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DAZAP1Q96EP5 407 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 LRRC46Q96FV0 321 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 ESRP2Q9H6T0 727 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 HIST1H1CP16403 213 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 NXNL2Q5VZ03 156 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DDOQ99489 341 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 A4GALTQ9NPC4 353 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 HMGN4O00479 90 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 BORAQ6PGQ7 559 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 CHCHD4Q8N4Q1 142 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 OR52H1Q8NGJ2 320 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 OR4A16Q8NH70 328 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 ACSS1Q9NUB1 689 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC25A37Q9NYZ2 338 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 A0A087WUU8 490 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 SHISA8B8ZZ34 492 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DVL1O14640 695 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 ABHD16AO95870 558 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 LGI1O95970 557 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 TNFSF4P23510 183 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DVL1P1P54792 670 aaPredicted RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 TRA2BP62995 288 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 RPP30P78346 268 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 DCDP81605 110 aaKnown RBP12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 ZNF74Q16587 644 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 MPEG1Q2M385 716 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 C1orf123Q9NWV4 160 aa12.51□□□□□ -0.41
TGFBR3-201ENST00000212355 EMDP50402 254 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 RPL11P62913 178 aaKnown RBP12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 GABREP78334 506 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 OR52I2Q8NH67 350 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 OR51E1Q8TCB6 317 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 ASB17Q8WXJ9 295 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 UBQLN3Q9H347 655 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 LUZP4Q9P127 313 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 A0A0A6YYJ9 748 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 LRIT2A6NDA9 550 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 POM121BA6NF01 834 aa12.5□□□□□ -0.41
TGFBR3-201ENST00000212355 AKR7A2O43488 359 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms