RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 SFRP4Q6FHJ7 346 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 NAA40Q86UY6 237 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 SPPL3Q8TCT6 385 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 CORO2AQ92828 525 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ARRDC3Q96B67 414 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 WDR83Q9BRX9 315 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 DPH1Q9BZG8 443 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 SOX17Q9H6I2 414 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 RANGRFQ9HD47 186 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 SH3BGRL2Q9UJC5 107 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 EXO1Q9UQ84 846 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 TRAPPC4Q9Y296 219 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 B3GALT5Q9Y2C3 310 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 PIP5K1CO60331 668 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 MAS1P04201 325 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 HLA-DOBP13765 273 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 CX3CR1P49238 355 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 LAPTM4AQ15012 233 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 SLC7A6Q92536 515 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 RNF170Q96K19 258 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ZNF75AQ96N20 296 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 SLC6A17Q9H1V8 727 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 DAPP1Q9UN19 280 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 IGLV3-16A0A075B6K0 115 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ZP3P21754 424 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ABCD3P28288 659 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 GJA5P36382 358 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ERVFC1P60507 584 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 PFN3P60673 137 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 MLF2Q15773 248 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 BRICD5Q6PL45 260 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 NANOGP1Q8N7R0 232 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 NRG4Q8WWG1 115 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 SLC25A46Q96AG3 418 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 INPP5KQ9BT40 448 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ULBP2Q9BZM5 246 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 PLAGL1Q9UM63 463 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 PCDHB10Q9UN67 800 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 FLVCR2Q9UPI3 526 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 USF3Q68DE3 2245 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 GABRPO00591 440 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 MBP02144 154 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 PRR35P0CG20 571 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 BCL6P41182 706 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 VIPR2P41587 438 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ISL1P61371 349 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 H3F3CQ6NXT2 135 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ZNF681Q96N22 645 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 GABARAPH6UMI1 98 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 RTCAO00442 366 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 SNCGO76070 127 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 GBAP04062 536 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 POU3F2P20265 443 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 GIFP27352 417 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 VEGFBP49765 207 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 P2RX1P51575 399 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 SNRPD2P62316 118 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 GNPNAT1Q96EK6 184 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 MRGPRX4Q96LA9 322 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 NKX3-1Q99801 234 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 OCSTAMPQ9BR26 566 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 NKX2-4Q9H2Z4 354 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 NDUFB11Q9NX14 153 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ALKBH4Q9NXW9 302 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ZNF814B7Z6K7 855 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 CA3P07451 260 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 DTYMKP23919 212 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ZNF791Q3KP31 576 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 SH2D5Q6ZV89 423 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 LYSMD2Q8IV50 215 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 MTURNQ8N3F0 131 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ZNF561Q8N587 486 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 CADM4Q8NFZ8 388 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 FGGYQ96C11 551 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 MAP6Q96JE9 813 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 OR5B2Q96R09 309 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 USB1Q9BQ65 265 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 NMNAT2Q9BZQ4 307 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 METTL17Q9H7H0 456 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 STEAP1Q9UHE8 339 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 CD300LBA8K4G0 201 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 KHNYNO15037 678 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 TXNL1O43396 289 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 XRCC2O43543 280 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 KITLGP21583 273 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 DIO1P49895 249 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 SLC17A1Q14916 467 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 GTDC1Q4AE62 458 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 ZNF684Q5T5D7 378 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.33□□□□□ -1.562e-7■■■■■ 31.4
CBX5-201ENST00000209875 CLRN3Q8NCR9 226 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 OR51T1Q8NGJ9 327 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 TOE1Q96GM8 510 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 ACTL7AQ9Y615 435 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 NOTCH4Q99466 2003 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 TRAPPC2LH3BP13 241 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 MRPL3P09001 348 aaKnown RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 FGF9P31371 208 aaPredicted RBP5.33□□□□□ -1.56
CBX5-201ENST00000209875 TNFSF8P32971 234 aa5.33□□□□□ -1.56
CBX5-201ENST00000209875 RPS19P39019 145 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms