RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DEFB126Q9BYW3 111 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 OR2B2Q9GZK3 357 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 APMAPQ9HDC9 416 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 PRDM6Q9NQX0 595 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MED11Q9P086 117 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 FRRS1LQ9P0K9 344 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 AKAP7Q9P0M2 348 aaPredicted RBP7.45□□□□□ -1.22
VAMP3-201ENST00000054666 MYOTQ9UBF9 498 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 ITGB1BP2Q9UKP3 347 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 CAMK2AQ9UQM7 478 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 CACNG2Q9Y698 323 aa7.45□□□□□ -1.22
VAMP3-201ENST00000054666 SLC22A23A1A5C7 686 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 C2orf72A6NCS6 295 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 C9J4A7 227 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 FTCDNL1E5RQL4 147 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF593O00488 134 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 PIN1P1O15428 100 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF208O43345 1280 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 RAF1P04049 648 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 KLK3P07288 261 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 FGF5P12034 268 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 HLA-DMAP28067 261 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 HOXD12P35452 270 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 INSM1Q01101 510 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 MEP1BQ16820 701 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 TMEM205Q6UW68 189 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 LRRC69Q6ZNQ3 347 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 NCCRP1Q6ZVX7 275 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 KRT77Q7Z794 578 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 RELTQ969Z4 430 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 MAP6Q96JE9 813 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 MRGPRX4Q96LA9 322 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 C4orf45Q96LM5 186 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 DCBLD2Q96PD2 775 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 OR8B4Q96RC9 309 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ABHD1Q96SE0 405 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 CTRCQ99895 268 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 MESP1Q9BRJ9 268 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 MARVELD1Q9BSK0 173 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 WDR54Q9H977 334 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 LIN7BQ9HAP6 207 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 CHST11Q9NPF2 352 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 SERINC1Q9NRX5 453 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 OCIAD1Q9NX40 245 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ALKBH4Q9NXW9 302 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 POU2F3Q9UKI9 436 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 GTF2A1LQ9UNN4 478 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 WIF1Q9Y5W5 379 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ALG5Q9Y673 324 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ADAMTS9Q9P2N4 1935 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 CPAMD8Q8IZJ3 1885 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 IGLV1-36A0A0B4J1U3 117 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 TRBV5-5A0A0J9YX44 114 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 NPIPB13A6NJU9 1138 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 OR4C45A6NMZ5 311 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 A8MV72 311 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 NPIPB4C9JG80 1138 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 INMT-MINDY4F8WBC2 141 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ADAM10O14672 748 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 CTDSPLO15194 276 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF354AO60765 605 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 GPANK1O95872 356 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 PDGFBP01127 241 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 FAM157BP0CG42 384 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 CALCBP10092 127 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 CTLA4P16410 223 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF823P16415 610 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 SLC6A1P30531 599 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 RIDAP52758 137 aaKnown RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZP4Q12836 540 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 TRA2AQ13595 282 aaKnown RBP eCLIP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 EIF2B1Q14232 305 aaKnown RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 GPR176Q14439 515 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 NTRK2Q16620 822 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 RNASE12Q5GAN4 147 aaKnown RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 PEAR1Q5VY43 1037 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 C3orf33Q6P1S2 294 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ARSKQ6UWY0 536 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 STAC2Q6ZMT1 411 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 H1FNTQ75WM6 255 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 SLC35D2Q76EJ3 337 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 LINGO2Q7L985 606 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 GLCCI1Q86VQ1 547 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 TMPRSS12Q86WS5 348 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF227Q86WZ6 799 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF679Q8IYX0 411 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 AGBL5Q8NDL9 886 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 CAPSLQ8WWF8 208 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 TMEM106AQ96A25 262 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ORAI1Q96D31 301 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF486Q96H40 463 aaPredicted RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 FOXN4Q96NZ1 517 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 C7orf50Q9BRJ6 194 aaKnown RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 DPAGT1Q9H3H5 408 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ELOVL3Q9HB03 270 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 SLCO1C1Q9NYB5 712 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 NUFIP1Q9UHK0 495 aaKnown RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ING1Q9UK53 422 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms