RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 DUSP7Q16829 419 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CYP51A1Q16850 503 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 C2orf68Q2NKX9 166 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ACSF3Q4G176 576 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 CT45A2Q5DJT8 189 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SOHLH1Q5JUK2 328 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SLC35D3Q5M8T2 416 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 C1orf220Q5T0J3 134 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 C9orf64Q5T6V5 341 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SYT6Q5T7P8 510 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 TMEM268Q5VZI3 342 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FBXW9Q5XUX1 488 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PRR5LQ6MZQ0 368 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PWWP2BQ6NUJ5 590 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CDC42EP5Q6NZY7 148 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 LPCAT3Q6P1A2 487 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CD200R1LQ6Q8B3 271 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PAQR6Q6TCH4 344 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SPNS3Q6ZMD2 512 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 GCNT7Q6ZNI0 430 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CYB5R4Q7L1T6 521 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 MOB3BQ86TA1 216 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 KIR2DL5AQ8N109 375 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SLC39A11Q8N1S5 342 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PRSS35Q8N3Z0 413 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 RYBPQ8N488 228 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 TMEM199Q8N511 208 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 BMPERQ8N8U9 685 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 TERB1Q8NA31 727 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 C9orf106Q8NAJ2 232 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR1M1Q8NGA1 313 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR4F15Q8NGB8 312 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR4F6Q8NGB9 312 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR10G3Q8NGC4 313 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR56A1Q8NGH5 318 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR52H1Q8NGJ2 320 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR6M1Q8NGM8 313 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR6K2Q8NGY2 324 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 KIR2DL5BQ8NHK3 375 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 PLPPR1Q8TBJ4 325 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FAM45AQ8TCE6 357 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 GPR151Q8TDV0 419 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 LRRC15Q8TF66 581 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CASTOR1Q8WTX7 329 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SLC25A43Q8WUT9 341 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 SLC38A5Q8WUX1 472 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 UFD1Q92890 307 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 RERGQ96A58 199 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 RNF183Q96D59 192 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ZBED6CLQ96FA7 236 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 CENPNQ96H22 339 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 ITCHQ96J02 903 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FOPNLQ96NB1 174 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ATF6BQ99941 703 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 THAP7Q9BT49 309 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 GGACTQ9BVM4 153 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 NUDT9Q9BW91 350 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 MND1Q9BWT6 205 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CDCA4Q9BXL8 241 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ARL6Q9H0F7 186 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 DEFB129Q9H1M3 183 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 OR10A2Q9H208 303 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ARV1Q9H2C2 271 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 VCXQ9H320 206 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 UBE2ZQ9H832 354 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 NMNAT1Q9HAN9 279 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 TPT1P8Q9HAU6 139 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 POPDC2Q9HBU9 364 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 MIEF1Q9NQG6 463 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 SLC17A5Q9NRA2 495 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 CLN6Q9NWW5 311 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 DLL3Q9NYJ7 618 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 IL36GQ9NZH8 169 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FAM30AQ9NZY2 134 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 FBXO5Q9UKT4 447 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ELF5Q9UKW6 265 aaPredicted RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 HHLA2Q9UM44 414 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 COPS3Q9UNS2 423 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 YARS2Q9Y2Z4 477 aaKnown RBP2.66□□□□□ -1.98
VIM-210ENST00000637053 L3MBTL1Q9Y468 752 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 A3GALT2U3KPV4 340 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 ERICH3Q5RHP9 1530 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 WDR17Q8IZU2 1322 aa2.66□□□□□ -1.98
VIM-210ENST00000637053 COL3A1P02461 1466 aaPredicted RBP2.65□□□□□ -1.98
VIM-210ENST00000637053 USP47Q96K76 1375 aa2.65□□□□□ -1.98
VIM-210ENST00000637053 NSG1A0A0A6YYJ2 146 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 A0A0G2JNJ9 132 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 ASPDHA6ND91 283 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 ANTXRLA6NF34 631 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 TMEM202A6NGA9 273 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 SMIM9A6NGZ8 99 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 EIF4E1BA6NMX2 242 aaKnown RBP2.65□□□□□ -1.99
VIM-210ENST00000637053 GJE1A6NN92 205 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 EFCAB9A8MZ26 197 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 FAM25AB3EWG3 89 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 FAM25CB3EWG5 89 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 FAM25GB3EWG6 89 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 FAM157AC9JC47 383 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 LMO7DNF2Z398 122 aa2.65□□□□□ -1.99
VIM-210ENST00000637053 J3QR06 171 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms