RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZNF404Q494X3 552 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 ACSF3Q4G176 576 aaPredicted RBP12.89□□□□□ -0.35
LINC00339-208ENST00000634934 TMEM225Q6GV28 225 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 KLHL17Q6TDP4 642 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 FCRLAQ7L513 359 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 ZNF367Q7RTV3 350 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 KDM8Q8N371 416 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 DAPK2Q9UIK4 370 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 SH3BGRL2Q9UJC5 107 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 B3GALT5Q9Y2C3 310 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 AQP7P3A6NL99 342 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 C11orf98E9PRG8 122 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 H3BN98 237 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RNF13O43567 381 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RAMP1O60894 148 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 WDR1O75083 606 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 SERPINI2O75830 405 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 GABRA1P14867 456 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 POU1F1P28069 291 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 EPHA2P29317 976 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 H3F3AP84243 136 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RPL18Q07020 188 aaKnown RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 PUDPQ08623 228 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 COX10Q12887 443 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 TMEM201Q5SNT2 666 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 CD300LDQ6UXZ3 194 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 C3P1Q6ZMU1 363 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 GDPGP1Q6ZNW5 385 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RASSF6Q6ZTQ3 369 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 FANK1Q8TC84 345 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 DCSTAMPQ9H295 470 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 MCCC2Q9HCC0 563 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 TAS2R5Q9NYW4 299 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 IL20RAQ9UHF4 553 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 TINAGQ9UJW2 476 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 ZNF835Q9Y2P0 537 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 FLNCQ14315 2725 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 KDM4EB2RXH2 506 aaPredicted RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 MS4A18H0YCH9 400 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 FZD7O75084 574 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 PTP4A3O75365 173 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 AQP8O94778 261 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RCBTB2O95199 551 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 TGM6O95932 706 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 IGFBP1P08833 259 aaPredicted RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 UQCRC1P31930 480 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 PTGER4P35408 488 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RPL4P36578 427 aaKnown RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 SLC15A1P46059 708 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 P2RY4P51582 365 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 PSMD7P51665 324 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 PRPS1P60891 318 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 SNRPGP62308 76 aaKnown RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RPS4XP62701 263 aaKnown RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 FHL1Q13642 323 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 MS4A18Q3C1V0 323 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 ALG10Q5BKT4 473 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 C1orf185Q5T7R7 199 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 SMARCD3Q6STE5 483 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RPTNQ6XPR3 784 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 ZNF620Q6ZNG0 422 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 AHSA2Q719I0 299 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 DOLPP1Q86YN1 238 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 MCEMP1Q8IX19 187 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 ADPRHL1Q8NDY3 354 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 GGHQ92820 318 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 SAMD8Q96LT4 415 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 NDEL1Q9GZM8 345 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 OR52D1Q9H346 318 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 TP63Q9H3D4 680 aaPredicted RBP12.88□□□□□ -0.35
LINC00339-208ENST00000634934 REV1Q9UBZ9 1251 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 RASD1Q9Y272 281 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 HIF3AQ9Y2N7 669 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 ZNF175Q9Y473 711 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 CDH10Q9Y6N8 788 aa12.88□□□□□ -0.35
LINC00339-208ENST00000634934 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-208ENST00000634934 TRGV8A0A0C4DH27 118 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 PNMA8CA0A1B0GUJ8 204 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 ZAR1LA6NP61 321 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 AIREO43918 545 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 UPK1BO75841 260 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 NDUFB2O95178 105 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 PTTG1O95997 202 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 PLGP00747 810 aaPredicted RBP12.87□□□□□ -0.35
LINC00339-208ENST00000634934 F13BP05160 661 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 FCGR2AP12318 317 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 OSMP13725 252 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 CASP6P55212 293 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 CDC42P60953 191 aa12.87□□□□□ -0.35
LINC00339-208ENST00000634934 VBP1P61758 197 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms