RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ZMAT3Q9HA38 289 aaKnown RBP17.13■□□□□ 0.33
TARDBP-228ENST00000629725 SLC6A13Q9NSD5 602 aa17.13■□□□□ 0.33
TARDBP-228ENST00000629725 IGKV1D-42A0A075B6H8 117 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 A0A087WUJ7 227 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 DNAJC9-AS1A6NH13 148 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 ALDOCP09972 364 aaKnown RBP17.12■□□□□ 0.33
TARDBP-228ENST00000629725 LCN2P80188 198 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 RBBP4Q09028 425 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 OGFOD2Q6N063 350 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 DOK3Q7L591 496 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 WDFY1Q8IWB7 410 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 SKA3Q8IX90 412 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 MIER2Q8N344 545 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 SLC30A7Q8NEW0 376 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 FGFBP3Q8TAT2 258 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 C11orf40Q8WZ69 217 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 SLC41A3Q96GZ6 507 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 OR51B6Q9H340 312 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 SAP30LQ9HAJ7 183 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 KLHL14Q9P2G3 628 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-228ENST00000629725 CACNG2Q9Y698 323 aa17.12■□□□□ 0.33
TARDBP-228ENST00000629725 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 POM121CA8CG34 1229 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 SERPINE1P05121 402 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 LCKP06239 509 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 ZFP36P26651 326 aaKnown RBP17.11■□□□□ 0.33
TARDBP-228ENST00000629725 IL13RA1P78552 427 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 PUDPQ08623 228 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 IFFO1Q0D2I5 559 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 TUSC1Q2TAM9 212 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 PDCD4Q53EL6 469 aaKnown RBP17.11■□□□□ 0.33
TARDBP-228ENST00000629725 ALG10BQ5I7T1 473 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-228ENST00000629725 PAQR4Q8N4S7 273 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-228ENST00000629725 LSMEM1Q8N8F7 131 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 SCAIQ8N9R8 606 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 ZNF519Q8TB69 540 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 DNAJA4Q8WW22 397 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-228ENST00000629725 ZBTB18Q99592 522 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 GPA33Q99795 319 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 ASPNQ9BXN1 380 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 MEAF6Q9HAF1 191 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 TPT1P8Q9HAU6 139 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 AIG1Q9NVV5 245 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 THUMPD1Q9NXG2 353 aaKnown RBP17.11■□□□□ 0.33
TARDBP-228ENST00000629725 LGALS13Q9UHV8 139 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 NOTCH1P46531 2555 aa17.11■□□□□ 0.33
TARDBP-228ENST00000629725 A0A1B0GWA3 101 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 TYROBPO43914 113 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 ANP32DO95626 131 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 MT-ND5P03915 603 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 CCL2P13500 99 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 CSNK1A1P48729 337 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 ERVS71-1P61550 626 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 PMS2P3Q13401 168 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 MOGQ16653 247 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 TSTQ16762 297 aaKnown RBP17.1■□□□□ 0.33
TARDBP-228ENST00000629725 ARMCX4Q5H9R4 360 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 SLC22A24Q8N4F4 322 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 OR6S1Q8NH40 331 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 CCL17Q92583 94 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 CDH20Q9HBT6 801 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 NUP50Q9UKX7 468 aa17.1■□□□□ 0.33
TARDBP-228ENST00000629725 ENTPD5O75356 428 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 SERPINI2O75830 405 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 OR8G3PP0DMU2 310 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 DRD4P21917 467 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 AHCYP23526 432 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 HTR2AP28223 471 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 BAMBIQ13145 260 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 ULK3Q6PHR2 472 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 PXKQ7Z7A4 578 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 KIRREL3Q8IZU9 778 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 GLB1L3Q8NCI6 653 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-228ENST00000629725 ICA1LQ8NDH6 482 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 ST7LQ8TDW4 575 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 GTF3AQ92664 365 aaKnown RBP17.09■□□□□ 0.33
TARDBP-228ENST00000629725 POP5Q969H6 163 aaKnown RBP17.09■□□□□ 0.33
TARDBP-228ENST00000629725 SLC25A28Q96A46 364 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 ELMOD3Q96FG2 381 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 C1orf147Q96MC9 270 aaPredicted RBP17.09■□□□□ 0.33
TARDBP-228ENST00000629725 SORT1Q99523 831 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 EPYCQ99645 322 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 BCL2L14Q9BZR8 327 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 SLITRK2Q9H156 845 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 UBAP1Q9NZ09 502 aa17.09■□□□□ 0.33
TARDBP-228ENST00000629725 PPIAL4EA0A075B759 164 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 PPIAL4CA0A0B4J2A2 164 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 ISPDA4D126 451 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 PPIAL4DF5H284 164 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 BGLAPP02818 100 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 IL6P05231 212 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 RNASE1P07998 156 aaKnown RBP17.08■□□□□ 0.32
TARDBP-228ENST00000629725 PPIAL4FP0DN26 164 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 SLC1A6P48664 564 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 ATP4BP51164 291 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 UCP2P55851 309 aa17.08■□□□□ 0.32
TARDBP-228ENST00000629725 VSNL1P62760 191 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms