RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 EML2O95834 649 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 SPP1P10451 314 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 SPI1P17947 270 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 CDK2P24941 298 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 DCTDP32321 178 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 GJA4P35212 333 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 P2RX1P51575 399 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 GPR143P51810 404 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 MICBQ29980 383 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 NDUFAF6Q330K2 333 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 DPY19L2P2Q6ZN68 376 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 ZNF550Q7Z398 422 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 RD3Q7Z3Z2 195 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 TMEM52Q8NDY8 209 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 PTDSS2Q9BVG9 487 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 OR2M5A3KFT3 312 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 HMSDA8MTL9 139 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 CDC123O75794 336 aaPredicted RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 OR2A4O95047 310 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 NDUFB6O95139 128 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 PTHLHP12272 177 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 FAUP35544 74 aaKnown RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 MAGEB1P43366 347 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 RUNX3Q13761 415 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 ZNHIT3Q15649 155 aaPredicted RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 ELP2Q6IA86 826 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 MAMSTRQ6ZN01 415 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 PRSS41Q7RTY9 318 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 NPEPL1Q8NDH3 523 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 OR52R1Q8NGF1 315 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 OR10G6Q8NH81 332 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 GLYATL2Q8WU03 294 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 ZNRF4Q8WWF5 429 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 SGK3Q96BR1 496 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 ZNF285Q96NJ3 590 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 OR2A7Q96R45 310 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 ZFYVE21Q9BQ24 234 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 NKX2-4Q9H2Z4 354 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 EXOSC3Q9NQT5 275 aaKnown RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 DTX4Q9Y2E6 619 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 YBX2Q9Y2T7 364 aaKnown RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 MRPS2Q9Y399 296 aaKnown RBP7.94□□□□□ -1.14
VCL-207ENST00000624354 PCDHGA5Q9Y5G8 931 aa7.94□□□□□ -1.14
VCL-207ENST00000624354 A0A1B0GVT2 93 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 OR6C68A6NDL8 312 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 GPR31O00270 319 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 SULT1C2O00338 296 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 AQP8O94778 261 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 EGFP01133 1207 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 S100A8P05109 93 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 MAPK3P27361 379 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 GRPRP30550 384 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 FNTBP49356 437 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 NANOS3P60323 173 aaKnown RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 MGAT2Q10469 447 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 CBFBQ13951 182 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 C2orf27AQ580R0 203 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 PRRT3Q5FWE3 981 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 AVPI1Q5T686 147 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ZNF776Q68DI1 518 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 SLC6A19Q695T7 634 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 KIRREL2Q6UWL6 708 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 FAM220AQ7Z4H9 259 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 SPAG16Q8N0X2 631 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ZFP82Q8N141 532 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 SVBPQ8N300 66 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 DNAAF1Q8NEP3 725 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 OR5T3Q8NGG3 340 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 FGF13Q92913 245 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 MIB2Q96AX9 1013 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 WDR89Q96FK6 387 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 UTP23Q9BRU9 249 aaKnown RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 TSPAN10Q9H1Z9 355 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 WSB2Q9NYS7 404 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 MBD2Q9UBB5 411 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ETV7Q9Y603 341 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 SNRNP200O75643 2136 aaKnown RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 DENND4AQ7Z401 1863 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TBC1D3DA0A087WVF3 549 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TBC1D3IA0A087WXS9 549 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TBC1D3LB9A6J9 549 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 CYR61O00622 381 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ARPC3O15145 178 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TNFSF14O43557 240 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 OR10H2O60403 315 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 GLCEO94923 617 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 RPP14O95059 124 aaKnown RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 IGF2P01344 180 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TACSTD2P09758 323 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TBC1D3HP0C7X1 549 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 S100PP25815 95 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ACTR1BP42025 376 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 DLX5P56178 289 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TAS2R20P59543 309 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ACTR1AP61163 376 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 MELKQ14680 651 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 Q3ZCU0 254 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 FAM74A1Q5RGS3 127 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 FCRL6Q6DN72 434 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms