RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ANKRD34CP0C6C1 535 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 MAGEA8P43361 318 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 GMFBP60983 142 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 ZNF322Q6U7Q0 402 aaPredicted RBP9.46□□□□□ -0.9
VPS11-208ENST00000621676 ASB18Q6ZVZ8 466 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 ZNF676Q8N7Q3 588 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 THAP4Q8WY91 577 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 YIPF6Q96EC8 236 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 IMMP1LQ96LU5 166 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 SOX7Q9BT81 388 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 BEX2Q9BXY8 128 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 CALHM2Q9HA72 323 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 BEX1Q9HBH7 125 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 ADGRL4Q9HBW9 690 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 VSX1Q9NZR4 365 aaPredicted RBP9.46□□□□□ -0.9
VPS11-208ENST00000621676 CDV3Q9UKY7 258 aaKnown RBP9.46□□□□□ -0.9
VPS11-208ENST00000621676 TMEM5Q9Y2B1 443 aa9.46□□□□□ -0.9
VPS11-208ENST00000621676 MEIS3P1A6NDR6 274 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 SLC30A4O14863 429 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 KRT33AO76009 404 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 LIFP15018 202 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 HTR1FP30939 366 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 ADH7P40394 386 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 LIPNQ5VXI9 398 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 MAMSTRQ6ZN01 415 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 ANKRD13BQ86YJ7 626 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 PLCZ1Q86YW0 608 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 RNF113BQ8IZP6 322 aaKnown RBP9.45□□□□□ -0.9
VPS11-208ENST00000621676 TRUB1Q8WWH5 349 aaKnown RBP9.45□□□□□ -0.9
VPS11-208ENST00000621676 TMEM234Q8WY98 164 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 BARHL1Q9BZE3 327 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 HSPE1-MOB4S4R3N1 261 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 TRAV36DV7A0A075B6V5 113 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 FAM47E-STBD1D6RA91 191 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 PFDN1O60925 122 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 TMBIM6P55061 237 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 DCAF7P61962 342 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 ZNF85Q03923 595 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 FNDC7Q5VTL7 733 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 ARHGAP11AQ6P4F7 1023 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 TMEM205Q6UW68 189 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 POC1BQ8TC44 478 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 CYYR1Q96J86 154 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 CNN2Q99439 309 aaKnown RBP9.45□□□□□ -0.9
VPS11-208ENST00000621676 PTDSS2Q9BVG9 487 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 ING3Q9NXR8 418 aa9.45□□□□□ -0.9
VPS11-208ENST00000621676 IGLV3-12A0A075B6K2 115 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 GABRPO00591 440 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 TM4SF5O14894 197 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 RER1O15258 196 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 LMX1BO60663 402 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 RENP00797 406 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SELENOPP49908 381 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 NANOS3P60323 173 aaKnown RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 CD300CQ08708 224 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 RAB40BQ12829 278 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 OR1C1Q15619 314 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 TSC22D1Q15714 1073 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 OPN5Q6U736 354 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 TMPRSS11AQ6ZMR5 421 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 GLCCI1Q86VQ1 547 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 ELP5Q8TE02 316 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 FBLIM1Q8WUP2 373 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 KISS1RQ969F8 398 aaPredicted RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 TGIF2Q9GZN2 237 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 ELOVL3Q9HB03 270 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 BABAM2Q9NXR7 383 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SLCO1C1Q9NYB5 712 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SLC22A31A6NKX4 558 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 ZNF726A6NNF4 738 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 NPIPA2E9PIF3 369 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 NPIPA3F8WFD2 350 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 HPGDSO60760 199 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SLITRK5O94991 958 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 DLGAP3O95886 979 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 MSL3P1P0C860 447 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 CLRN1P58418 232 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SLC25A35Q3KQZ1 300 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 ZNF404Q494X3 552 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 OR10K2Q6IF99 312 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 KRT77Q7Z794 578 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 OR5D18Q8NGL1 313 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 NRIP3Q9NQ35 241 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 ASH2LQ9UBL3 628 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 B9D1Q9UPM9 204 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 A0A0J9YW62 118 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 GABARAPO95166 117 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 ANOS1P23352 680 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 GNALP38405 381 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 CRYBB2P43320 205 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 SUCLG1P53597 346 aaKnown RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 EIF2B1Q14232 305 aaKnown RBP9.44□□□□□ -0.9
VPS11-208ENST00000621676 ACSM3Q53FZ2 586 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 MEDAGQ5VYS4 303 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 FAM131AQ6UXB0 335 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 DCXRQ7Z4W1 244 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 ATCAYQ86WG3 371 aa9.44□□□□□ -0.9
VPS11-208ENST00000621676 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms