RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 FAM57BQ71RH2 274 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 CNRIP1Q96F85 164 aaPredicted RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 WDFY2Q96P53 400 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 NOTCH4Q99466 2003 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 URM1Q9BTM9 101 aaKnown RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 PAPOLGQ9BWT3 736 aaKnown RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 ACTR6Q9GZN1 396 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM9BQ9NQ34 198 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 LANCL2Q9NS86 450 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 BOKQ9UMX3 212 aaPredicted RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 POLHQ9Y253 713 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 A0A1W2PR48 441 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 OR14I1A6ND48 311 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 FGF17O60258 216 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 AKR7A3O95154 331 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 LALBAP00709 142 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SPINK2P20155 84 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 MAPK3P27361 379 aaPredicted RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 GABRA5P31644 462 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 CLDN6P56747 220 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 PITPNAQ00169 270 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 ADAM15Q13444 863 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 MORN4Q8NDC4 146 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 OR5M9Q8NGP3 310 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 OR13C9Q8NGT0 318 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 OR5AK2Q8NH90 309 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 HDAC8Q9BY41 377 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SEMA6CQ9H3T2 930 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 ENY2Q9NPA8 101 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 UFSP2Q9NUQ7 469 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 HAO2Q9NYQ3 351 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 TESQ9UGI8 421 aaKnown RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 DOCK9Q9BZ29 2069 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 TCF20Q9UGU0 1960 aaKnown RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 A0A096LPE4 126 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 A0A1W2PPZ6 126 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SMLR1H3BR10 107 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 CELA2BP08218 269 aaPredicted RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 LIMS3P0CW19 117 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 LIMS4P0CW20 117 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 BIDP55957 195 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 HTRA4P83105 476 aaPredicted RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 CDK5Q00535 292 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 DPTQ07507 201 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 GUSBP11Q6P575 273 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF322Q6U7Q0 402 aaPredicted RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 MEX3BQ6ZN04 569 aaKnown RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 COX15Q7KZN9 410 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SMAP2Q8WU79 429 aaPredicted RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM68Q96MH6 324 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 DCLRE1CQ96SD1 692 aaKnown RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 USB1Q9BQ65 265 aaKnown RBP7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 WASH6PQ9NQA3 447 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SCP2D1Q9UJQ7 156 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 UNC80Q8N2C7 3258 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 RAB27BO00194 218 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 MAGEB4O15481 346 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 PLA2G10O15496 165 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 PIP5K1CO60331 668 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 GALR3O60755 368 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 MPLP40238 635 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 EFR3AQ14156 821 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ESPNLQ6ZVH7 1005 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF687Q8N1G0 1237 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ELP5Q8TE02 316 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 CHAC2Q8WUX2 184 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 CRLF2Q9HC73 371 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 COPZ2Q9P299 210 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 WASF3Q9UPY6 502 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 UBE2J1Q9Y385 318 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 PLXNA2O75051 1894 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 IGHV3-15A0A0B4J1V0 119 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 TMEM129A0AVI4 362 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ZC3H12DA2A288 527 aaKnown RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 GABRPO00591 440 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 RGS13O14921 159 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 LYRM1O43325 122 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 UTS2O95399 124 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ABHD16AO95870 558 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 EPPINO95925 133 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 SERPINA5P05154 406 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 SERPINA2P20848 420 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 HLA-DMAP28067 261 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 TRHRP34981 398 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 NUDT1P36639 197 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 EPHA5P54756 1037 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 DEFA5Q01523 94 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 TNFRSF17Q02223 184 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 TSPAN31Q12999 210 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 SF3A2Q15428 464 aaKnown RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 DUSP5Q16690 384 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 RNASE10Q5GAN6 216 aaKnown RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 SFTPA2Q8IWL1 248 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF440Q8IYI8 595 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 TP53I13Q8NBR0 393 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 TMEM255BQ8WV15 326 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 CCDC107Q8WV48 283 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ZFPM2Q8WW38 1151 aa7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 ACOT11Q8WXI4 607 aaPredicted RBP7.58□□□□□ -1.2
PTPDC1-204ENST00000620992 C4orf36Q96KX1 117 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms