RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 C17orf47Q8NEP4 570 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 LAT2Q9GZY6 243 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 OR51V1Q9H2C8 321 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 TPK1Q9H3S4 243 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ISG20L2Q9H9L3 353 aaKnown RBP19.36■□□□□ 0.69
SGMS1-210ENST00000619438 NRIP3Q9NQ35 241 aa19.36■□□□□ 0.69
SGMS1-210ENST00000619438 ZGRF1Q86YA3 2104 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 A0A1W2PQD3 144 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 RGS5O15539 181 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 RNF13O43567 381 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 CLEC2LP0C7M8 214 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 CFL1P23528 166 aaKnown RBP19.35■□□□□ 0.69
SGMS1-210ENST00000619438 SLC6A8P48029 635 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 RPS7P62081 194 aaKnown RBP19.35■□□□□ 0.69
SGMS1-210ENST00000619438 MXD1Q05195 221 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 LYPD8Q6UX82 237 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 LAX1Q8IWV1 398 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 POC5Q8NA72 575 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 OR10H4Q8NGA5 316 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 OR10G3Q8NGC4 313 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 PHOSPHO1Q8TCT1 267 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 PAQR8Q8TEZ7 354 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 NOX1Q9Y5S8 564 aa19.35■□□□□ 0.69
SGMS1-210ENST00000619438 USP9YO00507 2555 aaPredicted RBP19.34■□□□□ 0.69
SGMS1-210ENST00000619438 ELOA3DA6NLF2 546 aaPredicted RBP19.34■□□□□ 0.69
SGMS1-210ENST00000619438 ACOT7O00154 380 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 LRRTM2O43300 516 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 CDC40O60508 579 aaKnown RBP eCLIP19.34■□□□□ 0.69
SGMS1-210ENST00000619438 REM1O75628 298 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 DNASE1L1P49184 302 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 PPIAP62937 165 aaKnown RBP19.34■□□□□ 0.69
SGMS1-210ENST00000619438 NTRK2Q16620 822 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 ELOA3BQ3SY89 546 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 DDI2Q5TDH0 399 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 PRAMEF20Q5VT98 475 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 APOOLQ6UXV4 268 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 GHDCQ8N2G8 530 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 POMGNT2Q8NAT1 580 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 SYT14Q8NB59 555 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 ELOA3Q8NG57 546 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 SETD6Q8TBK2 473 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 SMPDL3BQ92485 455 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 DDOQ99489 341 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 TMED9Q9BVK6 235 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 KCNN2Q9H2S1 579 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 MIXL1Q9H2W2 232 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 POLE4Q9NR33 117 aa19.34■□□□□ 0.69
SGMS1-210ENST00000619438 TRGV8A0A0C4DH27 118 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 PINLYPA6NC86 204 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 MCIDASD6RGH6 385 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 GTPBP1O00178 669 aaKnown RBP19.33■□□□□ 0.69
SGMS1-210ENST00000619438 OIP5O43482 229 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 PLPP2O43688 288 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 TSPAN2O60636 221 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 RGS9O75916 674 aaPredicted RBP19.33■□□□□ 0.69
SGMS1-210ENST00000619438 APEHP13798 732 aaKnown RBP19.33■□□□□ 0.69
SGMS1-210ENST00000619438 HIST1H1CP16403 213 aaKnown RBP19.33■□□□□ 0.69
SGMS1-210ENST00000619438 ABCD3P28288 659 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 CASP6P55212 293 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 FBXW4P57775 412 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 ZNF85Q03923 595 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 SLC35D3Q5M8T2 416 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 LCN1P1Q5VSP4 162 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 TMEM91Q6ZNR0 172 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 SIAH3Q8IW03 269 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 CYB561A3Q8NBI2 242 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 OR52E2Q8NGJ4 325 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 ERRFI1Q9UJM3 462 aaPredicted RBP19.33■□□□□ 0.69
SGMS1-210ENST00000619438 ZNF229Q9UJW7 825 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 SLC6A5Q9Y345 797 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 IER3IP1Q9Y5U9 82 aa19.33■□□□□ 0.69
SGMS1-210ENST00000619438 A0A0G2JMM0 328 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 A0A1W2PPB8 328 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 A0A1W2PRS3 328 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 FAM166BA8MTA8 275 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 KIR3DP1A8MWS1 328 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 CASKO14936 926 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 CLUP10909 449 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 LGALS3BPQ08380 585 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 GLYR1Q49A26 553 aaPredicted RBP19.33■□□□□ 0.68
SGMS1-210ENST00000619438 LSRQ86X29 649 aaPredicted RBP19.33■□□□□ 0.68
SGMS1-210ENST00000619438 LRRC17Q8N6Y2 441 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 OR5W2Q8NH69 310 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 NEIL3Q8TAT5 605 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 SSC4DQ8WTU2 575 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 ITPKCQ96DU7 683 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 JSRP1Q96MG2 331 aaPredicted RBP19.33■□□□□ 0.68
SGMS1-210ENST00000619438 DCLRE1CQ96SD1 692 aaKnown RBP19.33■□□□□ 0.68
SGMS1-210ENST00000619438 HDHD5Q9BXW7 423 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 NMNAT2Q9BZQ4 307 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 ADAM19Q9H013 955 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 DEFB127Q9H1M4 99 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 RERGLQ9H628 205 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 HIF3AQ9Y2N7 669 aa19.33■□□□□ 0.68
SGMS1-210ENST00000619438 CHCHD2Q9Y6H1 151 aaPredicted RBP19.33■□□□□ 0.68
SGMS1-210ENST00000619438 HEATR5AQ86XA9 2040 aa19.32■□□□□ 0.68
SGMS1-210ENST00000619438 A0A1B0GUH1 482 aa19.32■□□□□ 0.68
SGMS1-210ENST00000619438 A0A1W2PQL4 384 aaPredicted RBP19.32■□□□□ 0.68
SGMS1-210ENST00000619438 GNB5O14775 395 aa19.32■□□□□ 0.68
SGMS1-210ENST00000619438 EIF4E2O60573 245 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms