RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 BRICD5Q6PL45 260 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 C1orf87Q8N0U7 546 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 INSM2Q96T92 566 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 C20orf24Q9BUV8 137 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 OR52A1Q9UKL2 312 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 PCDHGA5Q9Y5G8 931 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 NAV1Q8NEY1 1877 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 TO15178 435 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 GALR3O60755 368 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 JTBO76095 146 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 TPPPO94811 219 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 OR2C1O95371 312 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 HLA-HP01893 362 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 NFYBP25208 207 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 RNF4P78317 190 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 GLYR1Q49A26 553 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 YOD1Q5VVQ6 348 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 KIAA0895LQ68EN5 471 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 MFSD12Q6NUT3 480 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 RFLNAQ6ZTI6 216 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 BTLAQ7Z6A9 289 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 NKAIN4Q8IVV8 208 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 RDH10Q8IZV5 341 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 LGI3Q8N145 548 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 TMEM99Q8N816 258 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 RELL2Q8NC24 303 aaPredicted RBP9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 APH1BQ8WW43 257 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 UCN3Q969E3 161 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 UHRF2Q96PU4 802 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 HRASLSQ9HDD0 168 aa9.84□□□□□ -0.83
CLTCL1-209ENST00000617103 OR5H14A6NHG9 310 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 TRAPPC2LH3BP13 241 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 CNMDO75829 334 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 IGFBP1P08833 259 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 CD1EP15812 388 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 BCKDHBP21953 392 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 NTHL1P78549 312 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC48A1Q6P1K1 146 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 KIAA0907Q7Z7F0 614 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 PRSS35Q8N3Z0 413 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 TEX19Q8NA77 164 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ABHD5Q8WTS1 349 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 GCDHQ92947 438 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ADAM19Q9H013 955 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 IFT22Q9H7X7 185 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 BET1O15155 118 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 LILRB3O75022 631 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 PVRP15151 417 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 MOB3CQ70IA8 216 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SYT9Q86SS6 491 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 BAGE3Q86Y29 109 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 BAGE2Q86Y30 109 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC16A11Q8NCK7 471 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 PSMF1Q92530 271 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 GAB2Q9UQC2 676 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 CSAG2Q9Y5P2 127 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF142P52746 1687 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 FITM1A5D6W6 292 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ARRDC5A6NEK1 342 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 RNF212BA8MTL3 300 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 TARM1B6A8C7 271 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 C17orf112F2Z3M2 114 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 H0YGG7 62 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 GPR171O14626 319 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 HBQ1P09105 142 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 JMJD7P0C870 316 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 CCL5P13501 91 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 MGMTP16455 207 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 POU3F3P20264 500 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 PSMB6P28072 239 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 EPHA2P29317 976 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 DUSP3P51452 185 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ADIRFQ15847 76 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 TMEM64Q6YI46 380 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF620Q6ZNG0 422 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 OLIG3Q7RTU3 272 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF595Q8IYB9 648 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 KLHDC9Q8NEP7 349 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 OR1J2Q8NGS2 313 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 PIGCQ92535 297 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ANKRD9Q96BM1 317 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 MSI2Q96DH6 328 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 RHNO1Q9BSD3 238 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 RNF32Q9H0A6 362 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 EPHX3Q9H6B9 360 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SPATA6Q9NWH7 488 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SLC5A10A0PJK1 596 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 H7C1Q1 480 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 P2RY10O00398 339 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SELENOFO60613 162 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 DFFBO76075 338 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SCAF4O95104 1147 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 SBK3P0C264 359 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 APEHP13798 732 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 MAOBP27338 520 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 RAB38P57729 211 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 PMPCAQ10713 525 aa9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 ZNF239Q16600 458 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-209ENST00000617103 LIPNQ5VXI9 398 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms