RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 BCL2L11O43521 198 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SULT1B1O43704 296 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ADAM11O75078 769 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SNAPC5O75971 98 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 F13BP05160 661 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 CD2P06729 351 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 TACSTD2P09758 323 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 RBM34P42696 430 aaKnown RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 PGDP52209 483 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 S100A10P60903 97 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 REEP5Q00765 189 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 DHODHQ02127 395 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 PRKCZQ05513 592 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 TPGS2Q68CL5 300 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 TMEM215Q68D42 235 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 FAM109BQ6ICB4 259 aaPredicted RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 C11orf87Q6NUJ2 197 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SLC48A1Q6P1K1 146 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ABHD17CQ6PCB6 329 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ACOT7LQ6ZUV0 252 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SLC36A1Q7Z2H8 476 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 GABRG1Q8N1C3 465 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 LRRC25Q8N386 305 aaPredicted RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 OR51A4Q8NGJ6 313 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 OR2L2Q8NH16 312 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 OR6S1Q8NH40 331 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 ZPLD1Q8TCW7 415 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 CXorf40AQ8TE69 158 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 IRF7Q92985 503 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 FAM46BQ96A09 425 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 IGSF21Q96ID5 467 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 GFI1Q99684 422 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 CGGBP1Q9UFW8 167 aaPredicted RBP6.1□□□□□ -1.43
LMO3-235ENST00000616247 LAMP5Q9UJQ1 280 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SLC22A7Q9Y694 548 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 WDR90Q96KV7 1748 aa6.1□□□□□ -1.43
LMO3-235ENST00000616247 SCN8AQ9UQD0 1980 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 NLRC5Q86WI3 1866 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 TSPAN11A1L157 253 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 C4orf51C9J302 202 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 PRKNO60260 465 aaPredicted RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 GPRIN2O60269 458 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 GREM1O60565 184 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ALOX12BO75342 701 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 CLEC3AO75596 197 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 NDUFB2O95178 105 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 GPANK1O95872 356 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 IFNA4P05014 189 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 CYBAP13498 195 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ST6GAL1P15907 406 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 TYRP1P17643 537 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ADRA2CP18825 462 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 PTAFRP25105 342 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ZNF136P52737 540 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 PRDX1Q06830 199 aaKnown RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 DHRS2Q13268 280 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ELAVL1Q15717 326 aaKnown RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 Q499Y3 187 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 DCST2Q5T1A1 773 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 MOB3CQ70IA8 216 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 HTR3DQ70Z44 454 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 SLC35D2Q76EJ3 337 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 DPY19L4Q7Z388 723 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 GALNTL5Q7Z4T8 443 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 NRROSQ86YC3 692 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 SLC35F3Q8IY50 421 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 GALNT16Q8N428 558 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 LINC01555Q8NAE3 123 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ACBD4Q8NC06 268 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 OR4K14Q8NGD5 310 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 OR6N1Q8NGY5 312 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 OR10G6Q8NH81 332 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 C15orf40Q8WUR7 153 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 RGP1Q92546 391 aaPredicted RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 MS4A6EQ96DS6 147 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ZNF514Q96K75 400 aaPredicted RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 PELI2Q9HAT8 420 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 MKKSQ9NPJ1 570 aaPredicted RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 SAGE1Q9NXZ1 904 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 SLC45A1Q9Y2W3 748 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 CPED1A4D0V7 1026 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 TMEM235A6NFC5 223 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 OIP5O43482 229 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 CDC40O60508 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
LMO3-235ENST00000616247 OR6A2O95222 327 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 PMS2P2O95744 297 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 TPT1P13693 172 aaKnown RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 CPMP14384 443 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ADCYAP1P18509 176 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 TLX1P31314 330 aaPredicted RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 CASRP41180 1078 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 RAB11BQ15907 218 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 C2orf76Q3KRA6 126 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ZNF528Q3MIS6 628 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 RNASE10Q5GAN6 216 aaKnown RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 NCMAPQ5T1S8 102 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 RPL13AP3Q6NVV1 102 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 JMJD6Q6NYC1 403 aaPredicted RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 C5orf46Q6UWT4 87 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 TMEM64Q6YI46 380 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms