RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 TBC1D3GQ6DHY5 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 SLC35D2Q76EJ3 337 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 FAM220AQ7Z4H9 259 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.48
MSH6-214ENST00000616033 OR52E1Q8NGJ3 308 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 OR5AK2Q8NH90 309 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 PARP12Q9H0J9 701 aaKnown RBP12.02□□□□□ -0.48
MSH6-214ENST00000616033 HRH4Q9H3N8 390 aa12.02□□□□□ -0.48
MSH6-214ENST00000616033 A0A0B4J2A0 478 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 DCDC2BA2VCK2 349 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 SPINT1O43278 529 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 OR2A4O95047 310 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 DCNP07585 359 aaKnown RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 CNR1P21554 472 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 EMDP50402 254 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 OVCH1Q7RTY7 1134 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 PRSS41Q7RTY9 318 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 NRROSQ86YC3 692 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ZNF565Q8N9K5 539 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 OR4K14Q8NGD5 310 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 RGP1Q92546 391 aaPredicted RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 S100PBPQ96BU1 408 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ZC3H10Q96K80 434 aaKnown RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 OR2A7Q96R45 310 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ELF4Q99607 663 aaPredicted RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 SHPKQ9UHJ6 478 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 RNF215Q9Y6U7 377 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 HEATR5AQ86XA9 2040 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 WDPCPO95876 746 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 VIPR2P41587 438 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ATP1B3P54709 279 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ACTA2P62736 377 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ACTG2P63267 376 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 EIF2B1Q14232 305 aaKnown RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 BAIAP2L2Q6UXY1 529 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 SSX9Q7RTT3 188 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ZSCAN1Q8NBB4 408 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 ZNF514Q96K75 400 aaPredicted RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 SYNDIG1Q9H7V2 258 aa12.02□□□□□ -0.49
MSH6-214ENST00000616033 PURGQ9UJV8 347 aaKnown RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 ZNF223Q9UK11 482 aaPredicted RBP12.02□□□□□ -0.49
MSH6-214ENST00000616033 OIP5O43482 229 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 ALOX12BO75342 701 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 HLA-AP01891 365 aaKnown RBP12.01□□□□□ -0.49
MSH6-214ENST00000616033 OR2T7P0C7T2 308 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 CPN1P15169 458 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 AKR1C4P17516 323 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 POU3F4P49335 361 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 GFOD2Q3B7J2 385 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 EIPR1Q53HC9 387 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 ACER2Q5QJU3 275 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 SPRED2Q7Z698 418 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 OR2T27Q8NH04 317 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 TMED6Q8WW62 240 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 SGK3Q96BR1 496 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 HAVCR1Q96D42 359 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 MAFFQ9ULX9 164 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 TUBAL3A6NHL2 446 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 ABCD4O14678 606 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 RAB3DO95716 219 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 RAB28P51157 221 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 DEFA6Q01524 100 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 GLT8D1Q68CQ7 371 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 STEAP1BQ6NZ63 245 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 TMEM64Q6YI46 380 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 DPY19L4Q7Z388 723 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 TMEM200AQ86VY9 491 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 DND1Q8IYX4 353 aaKnown RBP12.01□□□□□ -0.49
MSH6-214ENST00000616033 SPAG16Q8N0X2 631 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 SMARCD2Q92925 531 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 HHIPL1Q96JK4 782 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 SUCNR1Q9BXA5 334 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 LMAN2LQ9H0V9 348 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 INPP5EQ9NRR6 644 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 PRR13Q9NZ81 148 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 FLRT3Q9NZU0 649 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 KLHDC2Q9Y2U9 406 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 PRNPP04156 253 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 OR4E1P0C645 316 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 PRSS3P35030 304 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 HSD17B2P37059 387 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 NPBWR1P48145 328 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 PDZK1IP1Q13113 114 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 PLPP4Q5VZY2 271 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 C3orf33Q6P1S2 294 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 ARHGAP11AQ6P4F7 1023 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 ETV3LQ6ZN32 361 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 STX12Q86Y82 276 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 SFXN5Q8TD22 340 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 PPP1R1CQ8WVI7 109 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 OR8D1Q8WZ84 308 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 TLNRD1Q9H1K6 362 aa12.01□□□□□ -0.49
MSH6-214ENST00000616033 CGGBP1Q9UFW8 167 aaPredicted RBP12.01□□□□□ -0.49
MSH6-214ENST00000616033 OR2T1O43869 369 aa12□□□□□ -0.49
MSH6-214ENST00000616033 CD34P28906 385 aa12□□□□□ -0.49
MSH6-214ENST00000616033 CSF2RBP32927 897 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms