RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ZNF354AO60765 605 aaPredicted RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 ARNTP27540 789 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 SLC10A6Q3KNW5 377 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SLC24A5Q71RS6 500 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 IFI44Q8TCB0 444 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 DAZLQ92904 295 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 AMDHD1Q96NU7 426 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 PTPN18Q99952 460 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CSNK1G1Q9HCP0 422 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TMED3Q9Y3Q3 217 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 BCL6P41182 706 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 DOC2AQ14183 400 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 BEX5Q5H9J7 111 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TECPR1Q7Z6L1 1165 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR52B6Q8NGF0 335 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 GCDHQ92947 438 aaPredicted RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 MYOTQ9UBF9 498 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ADAM11O75078 769 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 HAAOP46952 286 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 FXYD4P59646 89 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ZNF85Q03923 595 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SLC22A6Q4U2R8 563 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 RNLSQ5VYX0 342 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TMEM71Q6P5X7 295 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 C12orf54Q6X4T0 127 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 MRPS23Q9Y3D9 190 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 WNK3Q9BYP7 1800 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR5H15A6NDH6 313 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR5H1A6NKK0 313 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 PEX10O60683 326 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CT45A6P0DMU7 189 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CT45A5P0DMU8 189 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CT45A7P0DMV0 189 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SDC1P18827 310 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 RPL12P30050 165 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 GABRA3P34903 492 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CT45A1Q5HYN5 189 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ZNF343Q6P1L6 599 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CISD2Q8N5K1 135 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR14A16Q8NHC5 309 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CT45A3Q8NHU0 189 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 HGDQ93099 445 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 PNLIPRP3Q17RR3 467 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SFRP5Q5T4F7 317 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 LRFN4Q6PJG9 635 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 LINC00116Q8NCU8 138 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 DUSP18Q8NEJ0 188 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 SGIP1Q9BQI5 828 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ALG12Q9BV10 488 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 WDR76Q9H967 626 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 FAM74A7A6NL05 159 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ELAVL4P26378 380 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 MEX3BQ6ZN04 569 aaKnown RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 ACPTQ9BZG2 426 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ELF5Q9UKW6 265 aaPredicted RBP8.14□□□□□ -1.11
TTC28-208ENST00000612946 OR5AC1P0C628 307 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CATSPEREQ5SY80 951 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 DPY19L2P2Q6ZN68 376 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 EXD3Q8N9H8 876 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 CPT1CQ8TCG5 803 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 C2orf50Q96LR7 162 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 ATP5SQ99766 215 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 LRFN3Q9BTN0 628 aa8.14□□□□□ -1.11
TTC28-208ENST00000612946 TBC1D3DA0A087WVF3 549 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TBC1D3IA0A087WXS9 549 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TBC1D3LB9A6J9 549 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 ACTL6BO94805 426 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 CHRM4P08173 479 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TBC1D3HP0C7X1 549 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 PIGAP37287 484 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TBC1D3CQ6IPX1 549 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TBC1D3Q8IZP1 549 aaPredicted RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR5L1Q8NGL2 311 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 DYRK2Q92630 601 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SMIM19Q96E16 107 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SLC46A1Q96NT5 459 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 DPH1Q9BZG8 443 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 LRP6O75581 1613 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 DUXBA0A1W2PPF3 345 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR5K4A6NMS3 321 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 HNRNPA2B1P22626 353 aaKnown RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 SLC5A12Q1EHB4 618 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR2W3Q7Z3T1 314 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 HSD17B11Q8NBQ5 300 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR9A2Q8NGT5 310 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 OR6K2Q8NGY2 324 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 ARNT2Q9HBZ2 717 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 SLC7A7Q9UM01 511 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 A6NL46 340 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 KLF8O95600 359 aaPredicted RBP8.13□□□□□ -1.11
TTC28-208ENST00000612946 GDF5P43026 501 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 B2MP61769 119 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 TPBGQ13641 420 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 MYLKQ15746 1914 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 LCN10Q6JVE6 187 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 LINC00518Q8N0U6 118 aa8.13□□□□□ -1.11
TTC28-208ENST00000612946 CREBZFQ9NS37 354 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms