RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 KCNE3Q9Y6H6 103 aa9.93□□□□□ -0.82
FAM3A-221ENST00000612856 A0A1B0GTQ1 180 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 A6NLC8 198 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 F8W036 122 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 TRIM77I1YAP6 450 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 PRICKLE3O43900 615 aaPredicted RBP9.92□□□□□ -0.82
FAM3A-221ENST00000612856 LSSP48449 732 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 SSR4P51571 173 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 EPHA4P54764 986 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 CAMK2DQ13557 499 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 KIAA0040Q15053 153 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 ENTPD8Q5MY95 495 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 FAM71E1Q6IPT2 247 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 FAHD1Q6P587 224 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 OPN5Q6U736 354 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 ADGRG3Q86Y34 549 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 CPOQ8IVL8 374 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 NAXDQ8IW45 347 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 C12orf45Q8N5I9 185 aaPredicted RBP9.92□□□□□ -0.82
FAM3A-221ENST00000612856 OR5M9Q8NGP3 310 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 TRMT10AQ8TBZ6 339 aaKnown RBP9.92□□□□□ -0.82
FAM3A-221ENST00000612856 GPR119Q8TDV5 335 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 MENTQ9BUN1 341 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 BIN3Q9NQY0 253 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 C14orf105Q9NVL8 296 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 PLEKHB1Q9UF11 243 aaPredicted RBP9.92□□□□□ -0.82
FAM3A-221ENST00000612856 LOC100509620A0A075B734 347 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 A0A1W2PPC1 479 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 RLN2P04090 185 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 EDNRAP25101 427 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 MTNR1AP48039 350 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 VN1R4Q7Z5H5 301 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 CEACAM19Q7Z692 300 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 SYT9Q86SS6 491 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 C1orf216Q8TAB5 229 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 RFKQ969G6 155 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 COX14Q96I36 57 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 LCORQ96JN0 433 aaPredicted RBP9.92□□□□□ -0.82
FAM3A-221ENST00000612856 GNRHR2Q96P88 292 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 MARVELD1Q9BSK0 173 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 GPN1Q9HCN4 374 aaPredicted RBP9.92□□□□□ -0.82
FAM3A-221ENST00000612856 GLS2Q9UI32 602 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 LAMP5Q9UJQ1 280 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 PPIL1Q9Y3C6 166 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 SHANK1Q9Y566 2161 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 IGLV3-16A0A075B6K0 115 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 TRBV23-1A0A0A0MS06 115 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 A0A1B0GVI7 797 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 TRAPPC13A5PLN9 417 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 ANXA2P2A6NMY6 339 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 LANCL1O43813 399 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 UTS2O95399 124 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 LPLP06858 475 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 EDN3P14138 238 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 CD46P15529 392 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 EVX1P49640 407 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 CASP6P55212 293 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 FLI1Q01543 452 aaPredicted RBP9.92□□□□□ -0.82
FAM3A-221ENST00000612856 MELKQ14680 651 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 TMED4Q7Z7H5 227 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 LRRC18Q8N456 261 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 KLHL36Q8N4N3 616 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 ACOT12Q8WYK0 555 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 CDCA4Q9BXL8 241 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 ACTR6Q9GZN1 396 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 ZNF407Q9C0G0 2248 aa9.92□□□□□ -0.82
FAM3A-221ENST00000612856 IGHV3-15A0A0B4J1V0 119 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 FAM74A7A6NL05 159 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 GPR171O14626 319 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 MPC2O95563 127 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 HMGN1P05114 100 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 NFYAP23511 347 aaPredicted RBP9.91□□□□□ -0.82
FAM3A-221ENST00000612856 SLC6A6P31641 620 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 EFNA3P52797 238 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 BLOC1S1P78537 153 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 FAM74A3Q4VXF1 159 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 FAM27D1Q5T7N8 215 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 SLC22A10Q63ZE4 541 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 FAAP20Q6NZ36 180 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 PAQR7Q86WK9 346 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 OR1J4Q8NGS1 313 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 OR13C2Q8NGS9 318 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 OR10K1Q8NGX5 313 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 RNASE11Q8TAA1 199 aaKnown RBP9.91□□□□□ -0.82
FAM3A-221ENST00000612856 MOAP1Q96BY2 351 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 NPAS1Q99742 590 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 EGLN3Q9H6Z9 239 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 EMC7Q9NPA0 242 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 CDH10Q9Y6N8 788 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 A0A0B4J203 849 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 HRKO00198 91 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 GABRPO00591 440 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 DDAH2O95865 285 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 OSMP13725 252 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 SHC1P29353 583 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 BSGP35613 385 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 USF2Q15853 346 aaPredicted RBP9.91□□□□□ -0.82
FAM3A-221ENST00000612856 ZIC1Q15915 447 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 PDSS1Q5T2R2 415 aa9.91□□□□□ -0.82
FAM3A-221ENST00000612856 GPR137CQ8N3F9 429 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms