RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 PARP8Q8N3A8 854 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 KLHL36Q8N4N3 616 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TRIML2Q8N7C3 387 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ZDHHC16Q969W1 377 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 DIRC2Q96SL1 478 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 EGLN1Q9GZT9 426 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 RNF121Q9H920 327 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 RPS6KB2Q9UBS0 482 aa13.02□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 LOC102725191A0A1B0GVB3 256 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PLSCR5A0PG75 271 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TRAPPC2LH3BP13 241 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SPRY3O43610 288 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SBK2P0C263 348 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CCL2P13500 99 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PRG2P13727 222 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CBLP22681 906 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 LARS2Q15031 903 aaKnown RBP13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TAF9Q16594 264 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TBC1D28Q2M2D7 210 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C5orf46Q6UWT4 87 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 RHOUQ7L0Q8 258 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PIWIL3Q7Z3Z3 882 aaKnown RBP13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NET1Q7Z628 596 aaPredicted RBP13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SKA3Q8IX90 412 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SPICQ8N5J4 248 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 GTF3AQ92664 365 aaKnown RBP13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SLC38A4Q969I6 547 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 LRMDAQ9H2I8 198 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C1orf198Q9H425 327 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TNFRSF19Q9NS68 423 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NOTCH1P46531 2555 aa13.01□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CLPSL1A2RUU4 121 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NGFP01138 241 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PTHP01270 115 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 IGHV4-38-2P0DP08 117 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ARRB2P32121 409 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 UCP2P55851 309 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PMS2P3Q13401 168 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CASP8Q14790 479 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ASPHD2Q6ICH7 369 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TMEM53Q6P2H8 277 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 FIP1L1Q6UN15 594 aaKnown RBP13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C9orf139Q6ZV77 190 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SERPINA11Q86U17 422 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 LRRC34Q8IZ02 419 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 OR1J2Q8NGS2 313 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TAAR8Q969N4 342 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 DCLRE1CQ96SD1 692 aaKnown RBP13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ASIC5Q9NY37 505 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CALML5Q9NZT1 146 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 OR5V1Q9UGF6 321 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 EGFL7Q9UHF1 273 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PYCARDQ9ULZ3 195 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ZNF232Q9UNY5 417 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ZNF443Q9Y2A4 671 aaPredicted RBP13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 POLR3KQ9Y2Y1 108 aaPredicted RBP13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 GPR45Q9Y5Y3 372 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 NPTNQ9Y639 398 aa13□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SLC22A31A6NKX4 558 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PIN1P1O15428 100 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 UBOX5O94941 541 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 FARS2O95363 451 aaKnown RBP12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 IGHV1-46P01743 117 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 IGHV3-13P01766 116 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 HLA-DOBP13765 273 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 KRT4P19013 534 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ALDH3A1P30838 453 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CSNK1A1P48729 337 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 HLXQ14774 488 aaPredicted RBP12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PDCD1Q15116 288 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 DPY19L1Q2PZI1 675 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SMU1Q2TAY7 513 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 RNF220Q5VTB9 566 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C4orf33Q8N1A6 199 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SLC22A24Q8N4F4 322 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PAQR4Q8N4S7 273 aaPredicted RBP12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ADPRHL1Q8NDY3 354 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 OR1J1Q8NGS3 322 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 FGFBP3Q8TAT2 258 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PANX1Q96RD7 426 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 P2RX2Q9UBL9 471 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 WNK2Q9Y3S1 2297 aa12.99□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TRAV36DV7A0A075B6V5 113 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 TRAV40A0A0B4J280 105 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 IQCMA0A1B0GVH7 501 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 MDFIC2A0A1B0GVS7 189 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CCDC154A6NI56 674 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 MS4A18H0YCH9 400 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SERPINI2O75830 405 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SNAP29O95721 258 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 C1QCP02747 245 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 SLC6A9P48067 706 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 CRISP3P54108 245 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 PLP2Q04941 152 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 MS4A18Q3C1V0 323 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 BTNL3Q6UXE8 466 aa12.98□□□□□ -0.33
NEDD8-MDP1-204ENST00000605847 ZNF621Q6ZSS3 439 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms