RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ZNF627Q7L945 461 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 PTOV1Q86YD1 416 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 RBM45Q8IUH3 476 aaKnown RBP10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 ARMC8Q8IUR7 673 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 SKA3Q8IX90 412 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 PAQR4Q8N4S7 273 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 GPR32P1Q8NGA4 272 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 CLDND2Q8NHS1 167 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 LRR1Q96L50 414 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 TSPAN32Q96QS1 320 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 EPYCQ99645 322 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 MCHR1Q99705 422 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 CCDC28BQ9BUN5 200 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 SPATA5L1Q9BVQ7 753 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR51B6Q9H340 312 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 TMEM38AQ9H6F2 299 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 B3GAT2Q9NPZ5 323 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 SELENONQ9NZV5 590 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 REV1Q9UBZ9 1251 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 CORINQ9Y5Q5 1042 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 NOX1Q9Y5S8 564 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 NBEAL1Q6ZS30 2694 aa10.39□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF726A6NNF4 738 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 VSTM5A8MXK1 200 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 KPNA4O00629 521 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 TCF21O43680 179 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 RGS9O75916 674 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 LYPD3O95274 346 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 RAB36O95755 333 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 C8BP07358 591 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 CCL2P13500 99 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 GPX2P18283 190 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 PPIBP23284 216 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 SLC6A2P23975 617 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 GLRXP35754 106 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 MTPNP58546 118 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 ERVS71-1P61550 626 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 DUSP7Q16829 419 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 DLEU7Q6UYE1 221 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 RANBP3LQ86VV4 465 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 CCDC36Q8IYA8 594 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 RFLNBQ8N5W9 214 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 LRRC17Q8N6Y2 441 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 HIPK4Q8NE63 616 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 IL17RDQ8NFM7 739 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR6T1Q8NGN1 323 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR5J2Q8NH18 312 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 OR6S1Q8NH40 331 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 VANGL1Q8TAA9 524 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 HPS1Q92902 700 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 TMEM54Q969K7 222 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 ARHGDIGQ99819 225 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 TMEM43Q9BTV4 400 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 NSRP1Q9H0G5 558 aaKnown RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF275Q9NSD4 429 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 FBXO9Q9UK97 447 aaPredicted RBP10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 SLC13A4Q9UKG4 626 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 ANGPT4Q9Y264 503 aa10.38□□□□□ -0.75
SOX2-OT-228ENST00000597828 A0A1W2PPW3 197 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 PRORSD1PA6NEY8 169 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 CHP2O43745 196 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 EDF1O60869 148 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 UBL3O95164 117 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 VENTXO95231 258 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 CH25HO95992 272 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 CLPTM1O96005 669 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 SAGP10523 405 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 MAGEB1P43366 347 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 GPR6P46095 362 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 PCBP3P57721 371 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 GALK2Q01415 458 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 ENTPD8Q5MY95 495 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 GKAP1Q5VSY0 366 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 LIPNQ5VXI9 398 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 LINC00114Q6XXX2 140 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 THSD4Q6ZMP0 1018 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 SLC35D2Q76EJ3 337 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 PXKQ7Z7A4 578 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 CPLX4Q7Z7G2 160 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 DHDDSQ86SQ9 333 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 GTF3AQ92664 365 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 THOC1Q96FV9 657 aaKnown RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF607Q96SK3 696 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 SH3GL3Q99963 347 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 SIKE1Q9BRV8 207 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 METTL17Q9H7H0 456 aaPredicted RBP10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 TAS2R5Q9NYW4 299 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 DUSP13Q9UII6 198 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 GMEB1Q9Y692 573 aa10.37□□□□□ -0.75
SOX2-OT-228ENST00000597828 EVPLLA8MZ36 301 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 SERPINB7O75635 380 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 RP2O75695 350 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 ACHEP22303 614 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 EVX1P49640 407 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 MYBPC1Q00872 1141 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 ZNF74Q16587 644 aa10.36□□□□□ -0.75
SOX2-OT-228ENST00000597828 CYP51A1Q16850 503 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms