RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 PTOV1Q86YD1 416 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 RFLNBQ8N5W9 214 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 LRRC17Q8N6Y2 441 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.8□□□□□ -0.2
LIM2-202ENST00000596399 GPR32P1Q8NGA4 272 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 OR4D11Q8NGI4 311 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 CLDND2Q8NHS1 167 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 ZNF607Q96SK3 696 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 MCHR1Q99705 422 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 SH3GL3Q99963 347 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 CPPED1Q9BRF8 314 aaPredicted RBP13.8□□□□□ -0.2
LIM2-202ENST00000596399 TREM2Q9NZC2 230 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 SLC13A4Q9UKG4 626 aa13.8□□□□□ -0.2
LIM2-202ENST00000596399 PRORSD1PA6NEY8 169 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 CPSF4LA6NMK7 179 aaKnown RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 KPNA4O00629 521 aaPredicted RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 RGS9O75916 674 aaPredicted RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 LYPD3O95274 346 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 RAB36O95755 333 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 CH25HO95992 272 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 CLPTM1O96005 669 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 PPIBP23284 216 aaKnown RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 DVL1P1P54792 670 aaPredicted RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 MELKQ14680 651 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 LRFN4Q6PJG9 635 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 SLC35D2Q76EJ3 337 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 RANBP3LQ86VV4 465 aaPredicted RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 HIPK4Q8NE63 616 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 OR6T1Q8NGN1 323 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 TMEM54Q969K7 222 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 C7orf26Q96N11 449 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 TSPAN32Q96QS1 320 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 ARHGDIGQ99819 225 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 TMEM43Q9BTV4 400 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 OR51B6Q9H340 312 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 ZNF275Q9NSD4 429 aaPredicted RBP13.79□□□□□ -0.2
LIM2-202ENST00000596399 TAS2R5Q9NYW4 299 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 SPEF1Q9Y4P9 236 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 GMEB1Q9Y692 573 aa13.79□□□□□ -0.2
LIM2-202ENST00000596399 SERPINB7O75635 380 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 VENTXO95231 258 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 FAM157BP0CG42 384 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 MAGEB1P43366 347 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 GPR6P46095 362 aaPredicted RBP13.78□□□□□ -0.2
LIM2-202ENST00000596399 ERVS71-1P61550 626 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 GALK2Q01415 458 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 RUNDC3AQ59EK9 446 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 ENTPD8Q5MY95 495 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 SLC22A24Q8N4F4 322 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 VANGL1Q8TAA9 524 aaPredicted RBP13.78□□□□□ -0.2
LIM2-202ENST00000596399 RDH5Q92781 318 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 RACGAP1Q9H0H5 632 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 MS4A5Q9H3V2 200 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 OCEL1Q9H607 264 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 METTL17Q9H7H0 456 aaPredicted RBP13.78□□□□□ -0.2
LIM2-202ENST00000596399 HIF1ANQ9NWT6 349 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 GLTPQ9NZD2 209 aa13.78□□□□□ -0.2
LIM2-202ENST00000596399 EVPLLA8MZ36 301 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 B4DSR2 109 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 M0QX08 132 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 RNF13O43567 381 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 UBL3O95164 117 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 TGDSO95455 350 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 SERPINA5P05154 406 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 SAGP10523 405 aaPredicted RBP13.77□□□□□ -0.21
LIM2-202ENST00000596399 PCBP3P57721 371 aaKnown RBP13.77□□□□□ -0.21
LIM2-202ENST00000596399 MTPNP58546 118 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 RUNX1T1Q06455 604 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 ZNF74Q16587 644 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.21
LIM2-202ENST00000596399 THSD4Q6ZMP0 1018 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 RETREG3Q86VR2 466 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 OR6X1Q8NH79 312 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 GTF3AQ92664 365 aaKnown RBP13.77□□□□□ -0.21
LIM2-202ENST00000596399 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.21
LIM2-202ENST00000596399 CCDC28BQ9BUN5 200 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 SLC7A7Q9UM01 511 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 ANGPT4Q9Y264 503 aa13.77□□□□□ -0.21
LIM2-202ENST00000596399 A0A1W2PPW3 197 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 PPIHO43447 177 aaKnown RBP13.76□□□□□ -0.21
LIM2-202ENST00000596399 CHP2O43745 196 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 CDC14BO60729 498 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 RP2O75695 350 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 OR6A2O95222 327 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 MT-ATP6P00846 226 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 ACHEP22303 614 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 LMO4P61968 165 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 SWT1Q5T5J6 900 aaKnown RBP13.76□□□□□ -0.21
LIM2-202ENST00000596399 ZNF613Q6PF04 617 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 PIWIL3Q7Z3Z3 882 aaKnown RBP13.76□□□□□ -0.21
LIM2-202ENST00000596399 GLCCI1Q86VQ1 547 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 SLC30A7Q8NEW0 376 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 OR4K5Q8NGD3 323 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 LRRC8CQ8TDW0 803 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 ADAMTS16Q8TE57 1224 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 ZNF566Q969W8 418 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 TMEM186Q96B77 213 aa13.76□□□□□ -0.21
LIM2-202ENST00000596399 TMEM38BQ9NVV0 291 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms