RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF620Q6ZNG0 422 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 PYDC1Q8WXC3 89 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 TMEM54Q969K7 222 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 TSPAN32Q96QS1 320 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 GPX7Q96SL4 187 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-221ENST00000593026 DGCR6LQ9BY27 220 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 OR52D1Q9H346 318 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 DENND2DQ9H6A0 471 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF226Q9NYT6 803 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 GLTPQ9NZD2 209 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 PDP1Q9P0J1 537 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-221ENST00000593026 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF346Q9UL40 294 aaKnown RBP13.13□□□□□ -0.31
DDX39A-221ENST00000593026 ADAM18Q9Y3Q7 739 aa13.13□□□□□ -0.31
DDX39A-221ENST00000593026 ANKHD1Q8IWZ3 2542 aaKnown RBP13.13□□□□□ -0.31
DDX39A-221ENST00000593026 OR5H1A6NKK0 313 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 CENPBD1B2RD01 187 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 TRMUO75648 421 aaKnown RBP13.12□□□□□ -0.31
DDX39A-221ENST00000593026 GSTM3P21266 225 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 HOXC12P31275 282 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 SLC6A6P31641 620 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 ACVR1BP36896 505 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 RUNX1T1Q06455 604 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 RFX4Q33E94 735 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 TIMM23BQ5SRD1 257 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 GPR139Q6DWJ6 353 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 ALKBH2Q6NS38 261 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 RPL13AP3Q6NVV1 102 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 ZFP1Q6P2D0 407 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 DPY19L2P2Q6ZN68 376 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 P2RY8Q86VZ1 359 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 C17orf78Q8N4C9 275 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 ARIH2OSQ8N7S6 290 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF519Q8TB69 540 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 LRTOMTQ8WZ04 291 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 HSD17B8Q92506 261 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 MUCL1Q96DR8 90 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF570Q96NI8 536 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 MUS81Q96NY9 551 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 FEVQ99581 238 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 BDH2Q9BUT1 245 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 MRPL13Q9BYD1 178 aaKnown RBP13.12□□□□□ -0.31
DDX39A-221ENST00000593026 NTN4Q9HB63 628 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 NRIP3Q9NQ35 241 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 CDH10Q9Y6N8 788 aa13.12□□□□□ -0.31
DDX39A-221ENST00000593026 TEX13CA0A0J9YWL9 993 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 CYSRT1A8MQ03 144 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 XKRYO14609 159 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 THBDP07204 575 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 NR2C1P13056 603 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 RPS6KA3P51812 740 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 ARF1P84077 181 aaKnown RBP13.11□□□□□ -0.31
DDX39A-221ENST00000593026 CD47Q08722 323 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 TAB1Q15750 504 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 HIST3H3Q16695 136 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 ANKRD16Q6P6B7 361 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 SHQ1Q6PI26 577 aaKnown RBP13.11□□□□□ -0.31
DDX39A-221ENST00000593026 FAM122BQ7Z309 247 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 AMIGO2Q86SJ2 522 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 WFDC8Q8IUA0 241 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 HS3ST5Q8IZT8 346 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF295-AS1Q8N0V1 137 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 SYT14Q8NB59 555 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 OR52L1Q8NGH7 329 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 OR1K1Q8NGR3 316 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 MAGEE2Q8TD90 523 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-221ENST00000593026 HDAC2Q92769 488 aaKnown RBP13.11□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF837Q96EG3 531 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-221ENST00000593026 NRBF2Q96F24 287 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 SAMD8Q96LT4 415 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 Q96M85 177 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 NIPSNAP1Q9BPW8 284 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 IFT27Q9BW83 186 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 EGLN3Q9H6Z9 239 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF556Q9HAH1 456 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 KIF17Q9P2E2 1029 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 POFUT2Q9Y2G5 429 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 IER3IP1Q9Y5U9 82 aa13.11□□□□□ -0.31
DDX39A-221ENST00000593026 PKDREJQ9NTG1 2253 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 ZNF99A8MXY4 864 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-221ENST00000593026 ARHGEF9O43307 516 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 ENTPD5O75356 428 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 SOX14O95416 240 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 QDPRP09417 244 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
DDX39A-221ENST00000593026 ANXA8P13928 327 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 PRKACGP22612 351 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 CRYGSP22914 178 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 SDHAP31040 664 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 MYBPC1Q00872 1141 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 COX10Q12887 443 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 KRR1Q13601 381 aaKnown RBP13.1□□□□□ -0.31
DDX39A-221ENST00000593026 DAZAP2Q15038 168 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-221ENST00000593026 PPA1Q15181 289 aa13.1□□□□□ -0.31
DDX39A-221ENST00000593026 HIKESHIQ53FT3 197 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms