RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-240	ENST00000592815	ZNF35	P13682	527 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF14	P17017	642 aa	Predicted RBP	13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	GZMM	P51124	257 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZP4	Q12836	540 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	CYLC2	Q14093	348 aa	Predicted RBP	13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	VMAC	Q2NL98	169 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	TRMT5	Q32P41	509 aa	Known RBP	13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	INTS11	Q5TA45	600 aa	Known RBP	13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	FAM166A	Q6J272	317 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	NANOGP8	Q6NSW7	305 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	HIST3H2A	Q7L7L0	130 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	SKA3	Q8IX90	412 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	OR6X1	Q8NH79	312 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	HIST1H2AC	Q93077	130 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	TMEM54	Q969K7	222 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	MPP4	Q96JB8	637 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF75A	Q96N20	296 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	SIKE1	Q9BRV8	207 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	CHODL	Q9H9P2	273 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	NANOG	Q9H9S0	305 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	GLTP	Q9NZD2	209 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF224	Q9NZL3	707 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	KCNS2	Q9ULS6	477 aa		13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	YLPM1	P49750	1951 aa	Known RBP	13.88	□□□□□ -0.19
CIRBP-240	ENST00000592815	IGFBP1	P08833	259 aa	Predicted RBP	13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	PATE4	P0C8F1	98 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	UMPS	P11172	480 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF23	P17027	643 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	MSMP	Q1L6U9	139 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	LRFN4	Q6PJG9	635 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	CCDC80	Q76M96	950 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	UBASH3B	Q8TF42	649 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	TMEM158	Q8WZ71	300 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF566	Q969W8	418 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	TMEM120A	Q9BXJ8	343 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	MRPL37	Q9BZE1	423 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF229	Q9UJW7	825 aa		13.87	□□□□□ -0.19
CIRBP-240	ENST00000592815	LRP5L	A4QPB2	252 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	BLOC1S5-TXNDC5	H3BN57	136 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	PHF1	O43189	567 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	UBL3	O95164	117 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	TGFA	P01135	160 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	IGFBP5	P24593	272 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	GIF	P27352	417 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	CRYBA2	P53672	197 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	GALK2	Q01415	458 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	MELK	Q14680	651 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	RAB39A	Q14964	217 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	RABL3	Q5HYI8	236 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	FAM120AOS	Q5T036	256 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF786	Q8N393	782 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	SLC22A24	Q8N4F4	322 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	FGFBP3	Q8TAT2	258 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	RASSF5	Q8WWW0	418 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	MRPL24	Q96A35	216 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	LRRC58	Q96CX6	371 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	SLC25A44	Q96H78	314 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	SH3GL1	Q99961	368 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	ECSIT	Q9BQ95	431 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	SYT3	Q9BQG1	590 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	PRSS27	Q9BQR3	290 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	SLC19A3	Q9BZV2	496 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	PCDHAC1	Q9H158	963 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	TPK1	Q9H3S4	243 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	REV1	Q9UBZ9	1251 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	SH3GLB1	Q9Y371	365 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	CUBN	O60494	3623 aa		13.86	□□□□□ -0.19
CIRBP-240	ENST00000592815	LYNX1	G3V0Z9	82 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	SYNGR3	O43761	229 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	BCL10	O95999	233 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	QDPR	P09417	244 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	ASAH2B	P0C7U1	165 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	OR8G3P	P0DMU2	310 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	LYNX1	P0DP58	116 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	GLRX	P35754	106 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	EVX1	P49640	407 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	IL17REL	Q6ZVW7	336 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	CARM1	Q86X55	608 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	PHC2	Q8IXK0	858 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	SH3GL3	Q99963	347 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	SOX7	Q9BT81	388 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	ZNF426	Q9BUY5	554 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	REPIN1	Q9BWE0	567 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	MEPE	Q9NQ76	525 aa	Predicted RBP	13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	FBXL3	Q9UKT7	428 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	FZR1	Q9UM11	496 aa		13.85	□□□□□ -0.19
CIRBP-240	ENST00000592815	MALRD1	Q5VYJ5	2156 aa		13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	DHH	O43323	396 aa		13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	SERPINA5	P05154	406 aa		13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	VIM	P08670	466 aa	Known RBP	13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	H2AFX	P16104	143 aa	Predicted RBP	13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	SRD5A1	P18405	259 aa		13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	FUT1	P19526	365 aa		13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	TCN1	P20061	433 aa	Predicted RBP	13.84	□□□□□ -0.19
CIRBP-240	ENST00000592815	TNFRSF1B	P20333	461 aa		13.84	□□□□□ -0.19

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