RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 LGALS3BPQ08380 585 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 ST3GAL3Q11203 375 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 GABRA6Q16445 453 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 ZNF74Q16587 644 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 MS4A18Q3C1V0 323 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 ANKRD39Q53RE8 183 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 HMBOX1Q6NT76 420 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 KLHL17Q6TDP4 642 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 KLHL24Q6TFL4 600 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 ZNF704Q6ZNC4 412 aaPredicted RBP9.1□□□□□ -0.95
SDF2-208ENST00000589788 PXKQ7Z7A4 578 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 SPATA24Q86W54 205 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 NKAIN4Q8IVV8 208 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 C10orf67Q8IYJ2 551 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 PIK3C3Q8NEB9 887 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 C1orf162Q8NEQ5 155 aaPredicted RBP9.1□□□□□ -0.95
SDF2-208ENST00000589788 TMEM255BQ8WV15 326 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 TMEM239Q8WW34 195 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 PRRC1Q96M27 445 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 MUS81Q96NY9 551 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 ALKBH3Q96Q83 286 aaPredicted RBP9.1□□□□□ -0.95
SDF2-208ENST00000589788 PRSS27Q9BQR3 290 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 FNDC11Q9BVV2 318 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 LINC00470Q9BZP3 86 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 AMBRA1Q9C0C7 1298 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 ZNF229Q9UJW7 825 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 SAMD4AQ9UPU9 718 aaKnown RBP9.1□□□□□ -0.95
SDF2-208ENST00000589788 MED31Q9Y3C7 131 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 RNF115Q9Y4L5 304 aa9.1□□□□□ -0.95
SDF2-208ENST00000589788 NBPF19A0A087WUL8 3843 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 A0A1W2PR80 420 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 FAM181BA6NEQ2 426 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 ZNF726A6NNF4 738 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 CLOCKO15516 846 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 RNF13O43567 381 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 ENTPD5O75356 428 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 UPK3AO75631 287 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 ZNF432O94892 652 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 HPRP00739 348 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 MT-ND1P03886 318 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 YAP1P46937 504 aaKnown RBP9.09□□□□□ -0.95
SDF2-208ENST00000589788 ROR2Q01974 943 aaKnown RBP9.09□□□□□ -0.95
SDF2-208ENST00000589788 BSPH1Q075Z2 132 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 ACKR1Q16570 336 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 NCMAPQ5T1S8 102 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 CARD17Q5XLA6 110 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 NANOGNBQ7Z5D8 188 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 CYP4Z1Q86W10 505 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 C17orf78Q8N4C9 275 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 LRRC17Q8N6Y2 441 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 SGTBQ96EQ0 304 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 DUS3LQ96G46 650 aaKnown RBP9.09□□□□□ -0.95
SDF2-208ENST00000589788 OR2M2Q96R28 347 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 C7orf69Q9H7B7 122 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 B3GAT2Q9NPZ5 323 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 MEPEQ9NQ76 525 aaPredicted RBP9.09□□□□□ -0.95
SDF2-208ENST00000589788 A4GNTQ9UNA3 340 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 AMDHD2Q9Y303 409 aa9.09□□□□□ -0.95
SDF2-208ENST00000589788 MAGED1Q9Y5V3 778 aaPredicted RBP9.09□□□□□ -0.95
SDF2-208ENST00000589788 HRNRQ86YZ3 2850 aaPredicted RBP9.09□□□□□ -0.95
SDF2-208ENST00000589788 DHRS12A0PJE2 317 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 BLOC1S5-TXNDC5H3BN57 136 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 FKBP6O75344 327 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 WNT11O96014 354 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 PLAUP00749 431 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 ASAH2BP0C7U1 165 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 HLA-DOBP13765 273 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 HOXB6P17509 224 aaKnown RBP9.08□□□□□ -0.96
SDF2-208ENST00000589788 FUT1P19526 365 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 ZNF83P51522 516 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 UGT2B15P54855 530 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 SH3BGRP55822 239 aaPredicted RBP9.08□□□□□ -0.96
SDF2-208ENST00000589788 PRPS1P60891 318 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 UBE2NP61088 152 aaKnown RBP9.08□□□□□ -0.96
SDF2-208ENST00000589788 TRAM2Q15035 370 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 C1QTNF12Q5T7M4 302 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 ZFP1Q6P2D0 407 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 TMEM108Q6UXF1 575 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 OFCC1Q8IZS5 231 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 OR1K1Q8NGR3 316 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 OR6N1Q8NGY5 312 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 PFN4Q8NHR9 129 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 STMN2Q93045 179 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 PIGTQ969N2 578 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 MBD6Q96DN6 1003 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 RSRC1Q96IZ7 334 aaKnown RBP9.08□□□□□ -0.96
SDF2-208ENST00000589788 TXNDC15Q96J42 360 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 Q96M66 194 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 CCL19Q99731 98 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 FOXC2Q99958 501 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 EMC6Q9BV81 110 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 MAGIXQ9H6Y5 334 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 GPR35Q9HC97 309 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 SLC17A5Q9NRA2 495 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 MED29Q9NX70 200 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 RHCGQ9UBD6 479 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 FAM32AQ9Y421 112 aaKnown RBP9.08□□□□□ -0.96
SDF2-208ENST00000589788 SLC25A15Q9Y619 301 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 ROS1P08922 2347 aa9.08□□□□□ -0.96
SDF2-208ENST00000589788 DSCAMO60469 2012 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms