RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NMNAT3Q96T66 252 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 TP63Q9H3D4 680 aaPredicted RBP13.27□□□□□ -0.29
NFIX-208ENST00000587260 MRPS18AQ9NVS2 196 aaKnown RBP13.27□□□□□ -0.29
NFIX-208ENST00000587260 FKBP14Q9NWM8 211 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 SCN3BQ9NY72 215 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 DNAJC27Q9NZQ0 273 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 TPRKBQ9Y3C4 175 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 ZNF175Q9Y473 711 aa13.27□□□□□ -0.29
NFIX-208ENST00000587260 TRGV8A0A0C4DH27 118 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 OR6C68A6NDL8 312 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 EIF4E1BA6NMX2 242 aaKnown RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 ZNF716A6NP11 495 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 CENPBD1B2RD01 187 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 B8ZZF3 427 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 XPNPEP2O43895 674 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 FCGR2AP12318 317 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 SLC2A5P22732 501 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 ACVR1BP36896 505 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 C1DQ13901 141 aaKnown RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 BCDIN3DQ7Z5W3 292 aaKnown RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 JAZF1Q86VZ6 243 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 MCEMP1Q8IX19 187 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 GCNT2Q8N0V5 402 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 SDR9C7Q8NEX9 313 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 OR9K2Q8NGE7 335 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 OR6X1Q8NH79 312 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 IPCEF1Q8WWN9 437 aaPredicted RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 ZNF775Q96BV0 537 aaPredicted RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 TXNDC15Q96J42 360 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 ADAD1Q96M93 576 aaKnown RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 MRPL13Q9BYD1 178 aaKnown RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 MED29Q9NX70 200 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 CNOT2Q9NZN8 540 aaKnown RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 VSX1Q9NZR4 365 aaPredicted RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 PSORS1C1Q9UIG5 152 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.26□□□□□ -0.29
NFIX-208ENST00000587260 OSGIN2Q9Y236 505 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 RPL36Q9Y3U8 105 aaKnown RBP13.26□□□□□ -0.29
NFIX-208ENST00000587260 MED12LQ86YW9 2145 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 DOCK7Q96N67 2140 aa13.26□□□□□ -0.29
NFIX-208ENST00000587260 CFAP46Q8IYW2 2715 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 IGKV3D-15A0A087WSY6 115 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 PRSS37A4D1T9 235 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 FAM183AA6NL82 134 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 XKRYO14609 159 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 MRPS14O60783 128 aaKnown RBP13.25□□□□□ -0.29
NFIX-208ENST00000587260 PIPP12273 146 aaPredicted RBP13.25□□□□□ -0.29
NFIX-208ENST00000587260 HTR1FP30939 366 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 PTGER4P35408 488 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 SLC35A2P78381 396 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 IGFBP7Q16270 282 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 NSUN5P2Q63ZY6 315 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 NIPAL3Q6P499 406 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 LEG1Q6P5S2 330 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 B3GNT6Q6ZMB0 384 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 NCCRP1Q6ZVX7 275 aaPredicted RBP13.25□□□□□ -0.29
NFIX-208ENST00000587260 ZIC4Q8N9L1 334 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 CYB561A3Q8NBI2 242 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 KCNK17Q96T54 332 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 HCAR1Q9BXC0 346 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 RNF122Q9H9V4 155 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 H2AFY2Q9P0M6 372 aaPredicted RBP13.25□□□□□ -0.29
NFIX-208ENST00000587260 KLHL9Q9P2J3 617 aa13.25□□□□□ -0.29
NFIX-208ENST00000587260 ING1Q9UK53 422 aaPredicted RBP13.25□□□□□ -0.29
NFIX-208ENST00000587260 CD8B2A6NJW9 211 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 SLC22A31A6NKX4 558 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 FAM20BO75063 409 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 RENP00797 406 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 UQCRFS1P47985 274 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 CASP6P55212 293 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 CDH11P55287 796 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 BIDP55957 195 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 RNPS1Q15287 305 aaKnown RBP13.24□□□□□ -0.29
NFIX-208ENST00000587260 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.29
NFIX-208ENST00000587260 SLC35D3Q5M8T2 416 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 SEM1Q6ZVN7 128 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 MEPCEQ7L2J0 689 aaKnown RBP13.24□□□□□ -0.29
NFIX-208ENST00000587260 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.24□□□□□ -0.29
NFIX-208ENST00000587260 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 BBS1Q8NFJ9 593 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 GGHQ92820 318 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 WNT2BQ93097 391 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 SLC25A44Q96H78 314 aaPredicted RBP13.24□□□□□ -0.29
NFIX-208ENST00000587260 ZNF385AQ96PM9 386 aaKnown RBP13.24□□□□□ -0.29
NFIX-208ENST00000587260 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 TEAD3Q99594 435 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 CALHM2Q9HA72 323 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 AMBNQ9NP70 447 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 CCNB1IP1Q9NPC3 277 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 HAO2Q9NYQ3 351 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 WARS2Q9UGM6 360 aaKnown RBP13.24□□□□□ -0.29
NFIX-208ENST00000587260 FLVCR1Q9Y5Y0 555 aa13.24□□□□□ -0.29
NFIX-208ENST00000587260 PHF3Q92576 2039 aaKnown RBP13.24□□□□□ -0.29
NFIX-208ENST00000587260 SLC22A23A1A5C7 686 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 SLC35F4A4IF30 521 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 EFCAB10A6NFE3 127 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 TRIM64CA6NLI5 447 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 TRMUO75648 421 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms