RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLCO5A1Q9H2Y9 848 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 EGLN3Q9H6Z9 239 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 SMPD3Q9NY59 655 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-203ENST00000580986 GRHPRQ9UBQ7 328 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 SH3BGRL2Q9UJC5 107 aa9.21□□□□□ -0.94
CCDC47-203ENST00000580986 ERRFI1Q9UJM3 462 aaPredicted RBP9.21□□□□□ -0.94
CCDC47-203ENST00000580986 RALYQ9UKM9 306 aaKnown RBP9.21□□□□□ -0.94
CCDC47-203ENST00000580986 INTS1Q8N201 2190 aaKnown RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 SLC35F4A4IF30 521 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF726A6NNF4 738 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 H3BN98 237 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 J3QKU1 62 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 XKRYO14609 159 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 SLC43A1O75387 559 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 SOX14O95416 240 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 HMGN1P05114 100 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 ACADSP16219 412 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 NTF4P34130 210 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 BIDP55957 195 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 IL1RL1Q01638 556 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 FOXF2Q12947 444 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 KRR1Q13601 381 aaKnown RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 PTGES3Q15185 160 aaKnown RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 PGGHGQ32M88 737 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 NRN1LQ496H8 165 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 MESTQ5EB52 335 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 SLX4IPQ5VYV7 408 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 FBXW9Q5XUX1 488 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 PLXDC2Q6UX71 529 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 CASP12Q6UXS9 341 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 Q6ZT83 130 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 BEND4Q6ZU67 534 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 NUFIP2Q7Z417 695 aaKnown RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 BTLAQ7Z6A9 289 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 LSRQ86X29 649 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 CNEP1R1Q8N9A8 125 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 NOXO1Q8NFA2 376 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 LILRB4Q8NHJ6 448 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 TMEM54Q969K7 222 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF566Q969W8 418 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 NMD3Q96D46 503 aaKnown RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 HRASLS5Q96KN8 279 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 ERMAPQ96PL5 475 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 PITX2Q99697 317 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 IFT27Q9BW83 186 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 OR10A4Q9H209 315 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 FN3KQ9H479 309 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 CMC2Q9NRP2 79 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 MED29Q9NX70 200 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 VSX1Q9NZR4 365 aaPredicted RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 KLHL21Q9UJP4 597 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF346Q9UL40 294 aaKnown RBP9.2□□□□□ -0.94
CCDC47-203ENST00000580986 CLEC4AQ9UMR7 237 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 PROCRQ9UNN8 238 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 RNF6Q9Y252 685 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 ADAM18Q9Y3Q7 739 aa9.2□□□□□ -0.94
CCDC47-203ENST00000580986 PRSS37A4D1T9 235 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 A8MXE2 369 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 DLGAP1O14490 977 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 SLC16A6O15403 523 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 TRMUO75648 421 aaKnown RBP9.19□□□□□ -0.94
CCDC47-203ENST00000580986 PPP1R3DO95685 299 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 IFNGP01579 166 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 COX5AP20674 150 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 NOS3P29474 1203 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 PTDSS1P48651 473 aaKnown RBP9.19□□□□□ -0.94
CCDC47-203ENST00000580986 SELENOPP49908 381 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 SH3BGRP55822 239 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-203ENST00000580986 ERVK-25P63136 954 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 MYBPC1Q00872 1141 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 ITGADQ13349 1161 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 KEAP1Q14145 624 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 P2RY6Q15077 328 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF362Q5T0B9 420 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-203ENST00000580986 THEM4Q5T1C6 240 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 C10orf128Q5T292 105 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 LPCAT4Q643R3 524 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 ANKRD34AQ69YU3 496 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 C12orf73Q69YU5 71 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 NIPAL3Q6P499 406 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 VWA1Q6PCB0 445 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF627Q7L945 461 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 IGFN1Q86VF2 1251 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 C20orf196Q8IYI0 205 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF100Q8IYN0 542 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 RELL2Q8NC24 303 aaPredicted RBP9.19□□□□□ -0.94
CCDC47-203ENST00000580986 OR4Q3Q8NH05 313 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 NRG4Q8WWG1 115 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 TRUB1Q8WWH5 349 aaKnown RBP9.19□□□□□ -0.94
CCDC47-203ENST00000580986 TXNDC15Q96J42 360 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 Q96M85 177 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 SLC38A2Q96QD8 506 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 B3GAT2Q9NPZ5 323 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 GLTPQ9NZD2 209 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 NDRG4Q9ULP0 352 aaKnown RBP9.19□□□□□ -0.94
CCDC47-203ENST00000580986 IER3IP1Q9Y5U9 82 aa9.19□□□□□ -0.94
CCDC47-203ENST00000580986 TEX13CA0A0J9YWL9 993 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 H0YAE9 185 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 M0R3G1 203 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 SURF4O15260 269 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms