RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 GLIPR2Q9H4G4 154 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 REEP4Q9H6H4 257 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 KIR3DX1Q9H7L2 352 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 NT5DC2Q9H857 520 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF334Q9HCZ1 680 aaPredicted RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 CD209Q9NNX6 404 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 VCX3AQ9NNX9 186 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ESM1Q9NQ30 184 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 OCIAD1Q9NX40 245 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 MS4A12Q9NXJ0 267 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 TAS2R16Q9NYV7 291 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 ICAM5Q9UMF0 924 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PPIL1Q9Y3C6 166 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 CDH10Q9Y6N8 788 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 DICER1Q9UPY3 1922 aaKnown RBP2.63□□□□□ -1.99
KPNB1-208ENST00000580019 SCN11AQ9UI33 1791 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 UNC79Q9P2D8 2635 aa2.63□□□□□ -1.99
KPNB1-208ENST00000580019 PIK3C2GO75747 1445 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 IGHV4OR15-8A0A075B7B6 117 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 NSG1A0A0A6YYJ2 146 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 A0A1B0GW15 77 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 IDSB3KWA1 339 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 H3BMQ9 156 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ITGB1BP1O14713 200 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 TNFSF12O43508 249 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 SOX15O60248 233 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 PRKNO60260 465 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 GMDSO60547 372 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF432O94892 652 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 VAPBO95292 243 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 OXSR1O95747 527 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 HPP00738 406 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 RPN2P04844 631 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 GPIP06744 558 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF853P0CG23 659 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 PNMA6AP0CW24 399 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 MYOGP15173 224 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 SERPINA2P20848 420 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 BGNP21810 368 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 GABRR2P28476 465 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 IL12AP29459 219 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 FGF9P31371 208 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 FCGR2CP31995 323 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 CSKP41240 450 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ELK3P41970 407 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 NSG1P42857 185 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 XCR1P46094 333 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 DAP3P51398 398 aaKnown RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 CCNHP51946 323 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 HNRNPA3P51991 378 aaKnown RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 CRYBA2P53672 197 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 XGP55808 180 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ATP5J2P56134 94 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ERVK-16P61578 105 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 TUBA1BP68363 451 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 PAX2Q02962 417 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 CYLC2Q14093 348 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 TMEM187Q14656 261 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 DUSP7Q16829 419 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 UPP1Q16831 310 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 DGUOKQ16854 277 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ECSCRQ19T08 205 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ISXQ2M1V0 245 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ODF3L2Q3SX64 289 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 SAMD4BQ5PRF9 694 aaKnown RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 PPM1LQ5SGD2 360 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF790Q6PG37 636 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ASCL4Q6XD76 172 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF600Q6ZNG1 722 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 FAM122BQ7Z309 247 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ABHD12BQ7Z5M8 362 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 RBM23Q86U06 439 aaKnown RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 SLC47A2Q86VL8 602 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 APOBEC3FQ8IUX4 373 aaKnown RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF100Q8IYN0 542 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 SLC7A5P1Q8MH63 180 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 METTL4Q8N3J2 472 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 LIX1Q8N485 282 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF441Q8N8Z8 693 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 SNX31Q8N9S9 440 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 OR4C3Q8NH37 302 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 OR52E5Q8NH55 327 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 LYPD6BQ8NI32 183 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 FAM76AQ8TAV0 307 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 NUBPLQ8TB37 319 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 TBCKQ8TEA7 893 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 GATAD1Q8WUU5 269 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 UFD1Q92890 307 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 MYDGFQ969H8 173 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 TOMM40LQ969M1 308 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ISOC2Q96AB3 205 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 RNF170Q96K19 258 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 KCNA7Q96RP8 456 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 RNF2Q99496 336 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 CTRCQ99895 268 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ZNF670Q9BS34 389 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 CNPY3Q9BT09 278 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 UCK2Q9BZX2 261 aa2.62□□□□□ -1.99
KPNB1-208ENST00000580019 ACTR3CQ9C0K3 210 aaPredicted RBP2.62□□□□□ -1.99
KPNB1-208ENST00000580019 DEFB129Q9H1M3 183 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms