RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RBMS2Q15434 407 aaKnown RBP17.32■□□□□ 0.36
SCARF1-206ENST00000573852 TMUB2Q71RG4 321 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 ELSPBP1Q96BH3 223 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF524Q96C55 264 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 WDR76Q9H967 626 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 CLDN16Q9Y5I7 305 aa17.32■□□□□ 0.36
SCARF1-206ENST00000573852 PRAMEF2O60811 474 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 AKR7A3O95154 331 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 RLN1P04808 185 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 FCER2P06734 321 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 PTGS2P35354 604 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 UBE2IP63279 158 aaKnown RBP17.31■□□□□ 0.36
SCARF1-206ENST00000573852 DMWDQ09019 674 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 CD226Q15762 336 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 TUSC1Q2TAM9 212 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 KLHL26Q53HC5 615 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 ATG4DQ86TL0 474 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-206ENST00000573852 BIVMQ86UB2 503 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 PRSS35Q8N3Z0 413 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF676Q8N7Q3 588 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 SLC37A2Q8TED4 501 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 PPA2Q9H2U2 334 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 STEAP1Q9UHE8 339 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 LAMP5Q9UJQ1 280 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 KNL1Q8NG31 2342 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF35P13682 527 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 EGR4Q05215 589 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 BAMBIQ13145 260 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 FAM109BQ6ICB4 259 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-206ENST00000573852 OR7E24Q6IFN5 339 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 DPY19L4Q7Z388 723 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF227Q86WZ6 799 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 FRMD1Q8N878 549 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 OR51D1Q8NGF3 324 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 GAS2L1Q99501 681 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-206ENST00000573852 LPAR4Q99677 370 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 KCNK15Q9H427 330 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 MMP25Q9NPA2 562 aa17.31■□□□□ 0.36
SCARF1-206ENST00000573852 MEIS3P1A6NDR6 274 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF254O75437 659 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 B3GALNT1O75752 331 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 LPLP06858 475 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 MAOAP21397 527 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 CCR4P51679 360 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 MESTQ5EB52 335 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 DCAF12L2Q5VW00 463 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 WBP2NLQ6ICG8 309 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 TMEM81Q6P7N7 255 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 CBLN3Q6UW01 205 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 MUC20Q8N307 709 aaPredicted RBP17.3■□□□□ 0.36
SCARF1-206ENST00000573852 OR6N2Q8NGY6 317 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 DGAT2Q96PD7 388 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 OR10A5Q9H207 317 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 UBE2QL1A1L167 161 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 GGT3PA6NGU5 568 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 HMSDA8MTL9 139 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 RNH1P13489 461 aaKnown RBP17.3■□□□□ 0.36
SCARF1-206ENST00000573852 APEHP13798 732 aaKnown RBP17.3■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF542PQ5EBM4 170 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 OTPQ5XKR4 325 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 DMRTA2Q96SC8 542 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 KLHDC3Q9BQ90 382 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 ARL6Q9H0F7 186 aa17.3■□□□□ 0.36
SCARF1-206ENST00000573852 FXYD6-FXYD2A0A087WZ82 144 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 TRIM77I1YAP6 450 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 CTAG2O75638 210 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 RP2O75695 350 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 ASAH2BP0C7U1 165 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 ALOX5APP20292 161 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 MST1P26927 711 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 FAUP35544 74 aaKnown RBP17.29■□□□□ 0.36
SCARF1-206ENST00000573852 GRM7Q14831 915 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 ANKRD16Q6P6B7 361 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 Q6ZSR6 202 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 AVL9Q8NBF6 648 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 OR2AK2Q8NG84 335 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF417Q8TAU3 575 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 LIPHQ8WWY8 451 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 TSPAN32Q96QS1 320 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 AMELYQ99218 206 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 FXYD6Q9H0Q3 95 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 PRTFDC1Q9NRG1 225 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 GRHPRQ9UBQ7 328 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 CACNA1IQ9P0X4 2223 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 TEX46H3BTG2 121 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 GOSR2O14653 212 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 TSPAN4O14817 238 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 TPPPO94811 219 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 KDM4BO94953 1096 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 GABRA1P14867 456 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 NUP62P37198 522 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-206ENST00000573852 RPL18Q07020 188 aaKnown RBP17.29■□□□□ 0.36
SCARF1-206ENST00000573852 NKAIN2Q5VXU1 208 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 LRRC69Q6ZNQ3 347 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 ZSCAN1Q8NBB4 408 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 OR51S1Q8NGJ8 323 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 GPR148Q8TDV2 347 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 MED9Q9NWA0 146 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 SLC6A5Q9Y345 797 aa17.29■□□□□ 0.36
SCARF1-206ENST00000573852 LRP4O75096 1905 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms