RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 OR2M2Q96R28 347 aa18.16■□□□□ 0.5
VPS53-210ENST00000571456 ZNF556Q9HAH1 456 aa18.16■□□□□ 0.5
VPS53-210ENST00000571456 VNN3Q9NY84 501 aa18.16■□□□□ 0.5
VPS53-210ENST00000571456 TAS2R16Q9NYV7 291 aa18.16■□□□□ 0.5
VPS53-210ENST00000571456 SLC35F4A4IF30 521 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 ZNF587BE7ETH6 402 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 RPL36A-HNRNPH2H7BZ11 118 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 AHCYL1O43865 530 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 IGHG1P01857 330 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 CD14P08571 375 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 HLA-DOBP13765 273 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 COX5AP20674 150 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 PAX7P23759 505 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 SLC6A6P31641 620 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 NTF4P34130 210 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 RPL4P36578 427 aaKnown RBP18.15■□□□□ 0.5
VPS53-210ENST00000571456 SELENOPP49908 381 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 FHL1Q13642 323 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 LAPTM4AQ15012 233 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 ACKR1Q16570 336 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 SFRP5Q5T4F7 317 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 OR7E24Q6IFN5 339 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 RASSF6Q6ZTQ3 369 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 BIVMQ86UB2 503 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 P2RY8Q86VZ1 359 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 TMEM123Q8N131 208 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 GPR137CQ8N3F9 429 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 LRRC75AQ8NAA5 344 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 AQP11Q8NBQ7 271 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 C1orf162Q8NEQ5 155 aaPredicted RBP18.15■□□□□ 0.5
VPS53-210ENST00000571456 MOSPD2Q8NHP6 518 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 SPATA3Q8NHX4 192 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 FANK1Q8TC84 345 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 ZNF566Q969W8 418 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 NTN4Q9HB63 628 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 PDP1Q9P0J1 537 aaPredicted RBP18.15■□□□□ 0.5
VPS53-210ENST00000571456 NDRG3Q9UGV2 375 aa18.15■□□□□ 0.5
VPS53-210ENST00000571456 IMPA2O14732 288 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 IDH3BO43837 385 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 ENTPD5O75356 428 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 GASTP01350 101 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 F13BP05160 661 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 MPGP29372 298 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 UGT2B10P36537 528 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 RPS6KA3P51812 740 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 BIDP55957 195 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 CTXN1P60606 82 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 RPL27P61353 136 aaKnown RBP18.14■□□□□ 0.49
VPS53-210ENST00000571456 RFX4Q33E94 735 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 TSPO2Q5TGU0 170 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 ZDHHC13Q8IUH4 622 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 C20orf196Q8IYI0 205 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 OR9Q2Q8NGE9 314 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 OR52L1Q8NGH7 329 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 PYDC1Q8WXC3 89 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 ASB10Q8WXI3 467 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 KISS1RQ969F8 398 aaPredicted RBP18.14■□□□□ 0.49
VPS53-210ENST00000571456 BOD1Q96IK1 185 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 ALG12Q9BV10 488 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 POLDIP3Q9BY77 421 aaKnown RBP18.14■□□□□ 0.49
VPS53-210ENST00000571456 NRIP3Q9NQ35 241 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 NPDC1Q9NQX5 325 aaPredicted RBP18.14■□□□□ 0.49
VPS53-210ENST00000571456 SLC7A10Q9NS82 523 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 MED29Q9NX70 200 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 IL20Q9NYY1 176 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 ENOPH1Q9UHY7 261 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 PRSS50Q9UI38 385 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 CDH10Q9Y6N8 788 aa18.14■□□□□ 0.49
VPS53-210ENST00000571456 PDLIM1O00151 329 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 ARPC3O15145 178 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 SERPINI2O75830 405 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 GOSR1O95249 250 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 CSNK1A1P48729 337 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 ARMC4Q5T2S8 1044 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 HMBOX1Q6NT76 420 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 STAC2Q6ZMT1 411 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 ZNF620Q6ZNG0 422 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 Q71RC1 249 aaPredicted RBP18.13■□□□□ 0.49
VPS53-210ENST00000571456 DMRTC2Q8IXT2 367 aaPredicted RBP18.13■□□□□ 0.49
VPS53-210ENST00000571456 C17orf78Q8N4C9 275 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 OR6N1Q8NGY5 312 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 TXNDC15Q96J42 360 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 FEVQ99581 238 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 GPA33Q99795 319 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 OR52D1Q9H346 318 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 S100A14Q9HCY8 104 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 GRHPRQ9UBQ7 328 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 KCNN3Q9UGI6 736 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 BAIAP2Q9UQB8 552 aa18.13■□□□□ 0.49
VPS53-210ENST00000571456 TUBAL3A6NHL2 446 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 G3V2T6 193 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 MGRN1O60291 552 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 ACADSP16219 412 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 IL32P24001 234 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 SDHAP31040 664 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 FAM27E3Q08E93 113 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 FAPQ12884 760 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 PPP1R8Q12972 351 aaKnown RBP18.12■□□□□ 0.49
VPS53-210ENST00000571456 ADCK1Q86TW2 530 aa18.12■□□□□ 0.49
VPS53-210ENST00000571456 LSRQ86X29 649 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms