RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ZNF808Q8N4W9 903 aaPredicted RBP14.2□□□□□ -0.14
USB1-215ENST00000569252 ZIC4Q8N9L1 334 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 POMGNT2Q8NAT1 580 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 OR2T33Q8NG76 320 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 LILRB4Q8NHJ6 448 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 SLC25A44Q96H78 314 aaPredicted RBP14.2□□□□□ -0.14
USB1-215ENST00000569252 TXNDC15Q96J42 360 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 ZNF570Q96NI8 536 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 RBP7Q96R05 134 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 EMC6Q9BV81 110 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 VCX3BQ9H321 246 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 RNPEPL1Q9HAU8 725 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 MED29Q9NX70 200 aa14.2□□□□□ -0.14
USB1-215ENST00000569252 ING1Q9UK53 422 aaPredicted RBP14.2□□□□□ -0.14
USB1-215ENST00000569252 CACNA1CQ13936 2221 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 ARHGEF9O43307 516 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 TRAF3IP2O43734 574 aaPredicted RBP14.19□□□□□ -0.14
USB1-215ENST00000569252 IFNGP01579 166 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 HMGN1P05114 100 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 APEHP13798 732 aaKnown RBP14.19□□□□□ -0.14
USB1-215ENST00000569252 ACADSP16219 412 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 SDHAP31040 664 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 OR3A2P47893 321 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 SELENOPP49908 381 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 MYBPC1Q00872 1141 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 ITGADQ13349 1161 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 MELKQ14680 651 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 GUSBP1Q15486 140 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 LRRC36Q1X8D7 754 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 SLC36A3Q495N2 470 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 KDM4DQ6B0I6 523 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 SLC27A4Q6P1M0 643 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 LUZP2Q86TE4 346 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 JAZF1Q86VZ6 243 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 ZNF610Q8N9Z0 462 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 FNDC8Q8TC99 324 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 LRR1Q96L50 414 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 GPX7Q96SL4 187 aaPredicted RBP14.19□□□□□ -0.14
USB1-215ENST00000569252 PRRG3Q9BZD7 231 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 SLCO5A1Q9H2Y9 848 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 NRIP3Q9NQ35 241 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 MPDZO75970 2070 aa14.19□□□□□ -0.14
USB1-215ENST00000569252 CENPBD1B2RD01 187 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 EI24O14681 340 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 CNOT4O95628 575 aaKnown RBP14.18□□□□□ -0.14
USB1-215ENST00000569252 PPP1R3DO95685 299 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 IGHMP01871 453 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 GUCA1AP43080 201 aaPredicted RBP14.18□□□□□ -0.14
USB1-215ENST00000569252 CSNK1A1P48729 337 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 CRISP1P54107 249 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 PPP2R2BQ00005 443 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 FHL1Q13642 323 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 GINS1Q14691 196 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 FBXW9Q5XUX1 488 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 THSD4Q6ZMP0 1018 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 KIF18BQ86Y91 864 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 PARP8Q8N3A8 854 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 GALNT4Q8N4A0 578 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 ARIH2OSQ8N7S6 290 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 LRRC75AQ8NAA5 344 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 ASB10Q8WXI3 467 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 PLEKHA8Q96JA3 519 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 OR2M2Q96R28 347 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 ENKD1Q9H0I2 346 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 OPN3Q9H1Y3 402 aaPredicted RBP14.18□□□□□ -0.14
USB1-215ENST00000569252 RIBC2Q9H4K1 309 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 ASB6Q9NWX5 421 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 USE1Q9NZ43 259 aa14.18□□□□□ -0.14
USB1-215ENST00000569252 PHF3Q92576 2039 aaKnown RBP14.17□□□□□ -0.14
USB1-215ENST00000569252 ARHGAP21Q5T5U3 1957 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 FAM90A27PA6NNH2 459 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 ZNF587BE7ETH6 402 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 SOCS2O14508 198 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 ARPC3O15145 178 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 AHCYL1O43865 530 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 CLDN14O95500 239 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 ATP6V1G2O95670 118 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 RENP00797 406 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 ALPLP05186 524 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 COX6B1P14854 86 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 GIPRP48546 466 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 TGFBR3Q03167 851 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 CD47Q08722 323 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 FAPQ12884 760 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 LPCAT4Q643R3 524 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.17□□□□□ -0.14
USB1-215ENST00000569252 PACRGLQ8N7B6 248 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 SLC38A2Q96QD8 506 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 TSPAN32Q96QS1 320 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 RBM24Q9BX46 236 aaKnown RBP14.17□□□□□ -0.14
USB1-215ENST00000569252 HDHD5Q9BXW7 423 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 LINC00470Q9BZP3 86 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 ELOVL5Q9NYP7 299 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 REV1Q9UBZ9 1251 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 NKX1-2Q9UD57 310 aaPredicted RBP14.17□□□□□ -0.14
USB1-215ENST00000569252 KLHL21Q9UJP4 597 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 ADAM18Q9Y3Q7 739 aa14.17□□□□□ -0.14
USB1-215ENST00000569252 TEX13CA0A0J9YWL9 993 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 RIIAD1A6NNX1 92 aa14.16□□□□□ -0.14
USB1-215ENST00000569252 A8MXE2 369 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms