RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 MON2Q7Z3U7 1717 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 SMAD9O15198 467 aaKnown RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 ASGR2P07307 311 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 GP1BAP07359 652 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 FKBP2P26885 142 aaKnown RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 MEF2AQ02078 507 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 EGR3Q06889 387 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 VASNQ6EMK4 673 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 OR52W1Q6IF63 320 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 PRR27Q6MZM9 219 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 LMLNQ96KR4 655 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 LINC00052Q96N35 136 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 GPR78Q96P69 363 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 FBXL12Q9NXK8 326 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 IER3IP1Q9Y5U9 82 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 FAM227AF5H4B4 570 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 CNMDO75829 334 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 CLDN7O95471 211 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM225BP0DP42 221 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 FABP4P15090 132 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 SPNP16150 400 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 BMP5P22003 454 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 DDTP30046 118 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 NKX2-1P43699 371 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 NPY4RP50391 375 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 HMGA2P52926 109 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF85Q03923 595 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 TIGITQ495A1 244 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 OR5M10Q6IEU7 315 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 LCN10Q6JVE6 187 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 DPPA4Q7L190 304 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 CALHM3Q86XJ0 350 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 UEVLDQ8IX04 471 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 SPACA7Q96KW9 195 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 PACRGQ96M98 296 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 NKX2-4Q9H2Z4 354 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF552Q9H707 407 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 UCK1Q9HA47 277 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 DUXBA0A1W2PPF3 345 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 MANSC4A6NHS7 340 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 DDAH2O95865 285 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 DPP4P27487 766 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 GABRA3P34903 492 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 RAB28P51157 221 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 RBM23Q86U06 439 aaKnown RBP6.58□□□□□ -1.36
CNOT1-216ENST00000569240 OR51A2Q8NGJ7 313 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 OR10G6Q8NH81 332 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM106AQ96A25 262 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 DDIT4LQ96D03 193 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 CAPNS2Q96L46 248 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 ATG101Q9BSB4 218 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 RNF24Q9Y225 148 aa6.58□□□□□ -1.36
CNOT1-216ENST00000569240 RAD52P43351 418 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 DGCR2P98153 550 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 OR2B11Q5JQS5 317 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CYB5R2Q6BCY4 276 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PSAPL1Q6NUJ1 521 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF343Q6P1L6 599 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TMEM88Q6PEY1 159 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CPXM2Q8N436 756 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 OR4A4PQ8NGN8 299 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SMIM7Q9BQ49 75 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 RIMS4Q9H426 269 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-216ENST00000569240 FZD3Q9NPG1 666 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 IGKV6-21A0A0C4DH24 114 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SERTM1A2A2V5 107 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CEBPZOSA8MTT3 80 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SAP18O00422 153 aaKnown RBP6.57□□□□□ -1.36
CNOT1-216ENST00000569240 COX5AP20674 150 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 HOXC13P31276 330 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 POU3F4P49335 361 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ERVS71-1P61550 626 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TTLL10Q6ZVT0 673 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CLDN19Q8N6F1 224 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 OR4B1Q8NGF8 309 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TOMM40LQ969M1 308 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ORAI1Q96D31 301 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PTPN18Q99952 460 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 CNIH4Q9P003 139 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 MTFP1Q9UDX5 166 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF443Q9Y2A4 671 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-216ENST00000569240 LOC390937A0A1W2PQ73 354 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 DRGXA6NNA5 263 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 KDM4EB2RXH2 506 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PRF1P14222 555 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 G0S2P27469 103 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 RPL13AP40429 203 aaKnown RBP6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ASCL1P50553 236 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 PCBD1P61457 104 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF154Q13106 437 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 NKAIN1Q4KMZ8 207 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 TECPR1Q7Z6L1 1165 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 ZNF429Q86V71 674 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 MISPQ8IVT2 679 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 OIT3Q8WWZ8 545 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 SDSLQ96GA7 329 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 EPHX3Q9H6B9 360 aa6.57□□□□□ -1.36
CNOT1-216ENST00000569240 FBRSQ9HAH7 460 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms