RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 RAB1AP62820 205 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 TRMT5Q32P41 509 aaKnown RBP16.31■□□□□ 0.2
SPSB3-210ENST00000568416 IQCCQ4KMZ1 466 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 FAM166AQ6J272 317 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 NANOGP8Q6NSW7 305 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 LRRC17Q8N6Y2 441 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 SLC26A7Q8TE54 656 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 RASSF5Q8WWW0 418 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 MRPL24Q96A35 216 aaKnown RBP16.31■□□□□ 0.2
SPSB3-210ENST00000568416 NANOGQ9H9S0 305 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 DYNLRB1Q9NP97 96 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 NANSQ9NR45 359 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 GLTPQ9NZD2 209 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 ZNF229Q9UJW7 825 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 KCNS2Q9ULS6 477 aa16.31■□□□□ 0.2
SPSB3-210ENST00000568416 ARFGEF3Q5TH69 2177 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 HEATR1Q9H583 2144 aaKnown RBP16.3■□□□□ 0.2
SPSB3-210ENST00000568416 LOC100289279A0A1B0GTE1 492 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 SH3PXD2BA1X283 911 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 KPNA4O00629 521 aaPredicted RBP16.3■□□□□ 0.2
SPSB3-210ENST00000568416 UBL3O95164 117 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 RAB36O95755 333 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 ASAH2BP0C7U1 165 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 H2AFXP16104 143 aaPredicted RBP16.3■□□□□ 0.2
SPSB3-210ENST00000568416 GLRXP35754 106 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 GIPRP48546 466 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 EVX1P49640 407 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 MELKQ14680 651 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 PIWIL3Q7Z3Z3 882 aaKnown RBP16.3■□□□□ 0.2
SPSB3-210ENST00000568416 CALHM3Q86XJ0 350 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 SKA3Q8IX90 412 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 PHC2Q8IXK0 858 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 ZNF786Q8N393 782 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 FGFBP3Q8TAT2 258 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 MRPL37Q9BZE1 423 aaKnown RBP16.3■□□□□ 0.2
SPSB3-210ENST00000568416 MEPEQ9NQ76 525 aaPredicted RBP16.3■□□□□ 0.2
SPSB3-210ENST00000568416 FBXL3Q9UKT7 428 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 ALPK2Q86TB3 2170 aa16.3■□□□□ 0.2
SPSB3-210ENST00000568416 FXYD1O00168 92 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 PHF1O43189 567 aaPredicted RBP16.29■□□□□ 0.2
SPSB3-210ENST00000568416 RNF13O43567 381 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 ADRA2AP08913 450 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 TACSTD2P09758 323 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 CYLC2Q14093 348 aaPredicted RBP16.29■□□□□ 0.2
SPSB3-210ENST00000568416 FXNQ16595 210 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 RABL3Q5HYI8 236 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 LRFN4Q6PJG9 635 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 ZNF584Q8IVC4 421 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 TMEM158Q8WZ71 300 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 ZNF566Q969W8 418 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 SLC25A44Q96H78 314 aaPredicted RBP16.29■□□□□ 0.2
SPSB3-210ENST00000568416 SOX7Q9BT81 388 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 CHODLQ9H9P2 273 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 ARGLU1Q9NWB6 273 aaPredicted RBP16.29■□□□□ 0.2
SPSB3-210ENST00000568416 SPEF1Q9Y4P9 236 aa16.29■□□□□ 0.2
SPSB3-210ENST00000568416 CUBNO60494 3623 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 DHHO43323 396 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 HIST1H2ABP04908 130 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 PATE4P0C8F1 98 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 PGA4P0DJD7 388 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 PGA3P0DJD8 388 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 THBS2P35442 1172 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 RAB39AQ14964 217 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 COQ5Q5HYK3 327 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 HIST3H2AQ7L7L0 130 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 SLC22A24Q8N4F4 322 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 OR8J3Q8NGG0 315 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 UBASH3BQ8TF42 649 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 HIST1H2ACQ93077 130 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 LRRC58Q96CX6 371 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 SH3GL1Q99961 368 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 TPK1Q9H3S4 243 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 TMEM38BQ9NVV0 291 aa16.28■□□□□ 0.2
SPSB3-210ENST00000568416 SONP18583 2426 aaKnown RBP16.28■□□□□ 0.2
SPSB3-210ENST00000568416 YLPM1P49750 1951 aaKnown RBP16.27■□□□□ 0.2
SPSB3-210ENST00000568416 LRP5LA4QPB2 252 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 SYNGR3O43761 229 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 LILRA1O75019 489 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 SASH3O75995 380 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 SERPINA5P05154 406 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 OR8G3PP0DMU2 310 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 UMPSP11172 480 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 RIN1Q13671 783 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 HIST3H3Q16695 136 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 FAM120AOSQ5T036 256 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 IL17RELQ6ZVW7 336 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 NANOGNBQ7Z5D8 188 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 CARM1Q86X55 608 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 NKAIN4Q8IVV8 208 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 REV1Q9UBZ9 1251 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 SLC7A8Q9UHI5 535 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 BAG5Q9UL15 447 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 SH3GLB1Q9Y371 365 aa16.27■□□□□ 0.2
SPSB3-210ENST00000568416 M0R233 179 aa16.26■□□□□ 0.19
SPSB3-210ENST00000568416 ENTPD5O75356 428 aa16.26■□□□□ 0.19
SPSB3-210ENST00000568416 BCL10O95999 233 aa16.26■□□□□ 0.19
SPSB3-210ENST00000568416 TGFAP01135 160 aa16.26■□□□□ 0.19
SPSB3-210ENST00000568416 IGF2P01344 180 aa16.26■□□□□ 0.19
SPSB3-210ENST00000568416 MT-ND1P03886 318 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms