RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SLC7A8Q9UHI5 535 aa16.09■□□□□ 0.17
LINC01238-205ENST00000567549 STAB1Q9NY15 2570 aa16.09■□□□□ 0.17
LINC01238-205ENST00000567549 TRBV5-3A0A0A0MS03 114 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 SH3PXD2BA1X283 911 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 PLPP3O14495 311 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 TPST1O60507 370 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 CELA3BP08861 270 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 APEX1P27695 318 aaKnown RBP16.08■□□□□ 0.16
LINC01238-205ENST00000567549 GLRXP35754 106 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 PTDSS1P48651 473 aaKnown RBP16.08■□□□□ 0.16
LINC01238-205ENST00000567549 RAB1AP62820 205 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 DHDDSQ86SQ9 333 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 OR6X1Q8NH79 312 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF566Q969W8 418 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 EBF4Q9BQW3 602 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 EMC6Q9BV81 110 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 NANSQ9NR45 359 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 MED29Q9NX70 200 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 B3GNT2Q9NY97 397 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 SLAMF8Q9P0V8 285 aa16.08■□□□□ 0.16
LINC01238-205ENST00000567549 STX18Q9P2W9 335 aaKnown RBP16.08■□□□□ 0.16
LINC01238-205ENST00000567549 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 SERPINI2O75830 405 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 HLA-HP01893 362 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 ADRA2AP08913 450 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 OR8G3PP0DMU2 310 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 MMEL1Q495T6 779 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 GLIPR1L2Q4G1C9 344 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 RUNDC3AQ59EK9 446 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 DPP10Q8N608 796 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 TEX29Q8N6K0 151 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF837Q96EG3 531 aaPredicted RBP16.07■□□□□ 0.16
LINC01238-205ENST00000567549 SH3GL1Q99961 368 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 CPPED1Q9BRF8 314 aaPredicted RBP16.07■□□□□ 0.16
LINC01238-205ENST00000567549 LRMDAQ9H2I8 198 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 SEC61A2Q9H9S3 476 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 REV1Q9UBZ9 1251 aa16.07■□□□□ 0.16
LINC01238-205ENST00000567549 TRAPPC13A5PLN9 417 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 RNF13O43567 381 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 SEC14L2O76054 403 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 HPRP00739 348 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 NR2C1P13056 603 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 HLA-DOBP13765 273 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 B4GALT1P15291 398 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF14P17017 642 aaPredicted RBP16.06■□□□□ 0.16
LINC01238-205ENST00000567549 CD247P20963 164 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 SRP14P37108 136 aaKnown RBP16.06■□□□□ 0.16
LINC01238-205ENST00000567549 BIDP55957 195 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 PCBP3P57721 371 aaKnown RBP16.06■□□□□ 0.16
LINC01238-205ENST00000567549 ZP4Q12836 540 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 MOGQ16653 247 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 CR1LQ2VPA4 569 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 NRN1LQ496H8 165 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 CGB2Q6NT52 195 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 TMEM53Q6P2H8 277 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 UNQ6126/PRO20091Q6UXV3 157 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 SLC35D2Q76EJ3 337 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 RFLNBQ8N5W9 214 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 SMYD1Q8NB12 490 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 OR1J2Q8NGS2 313 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 SLC25A44Q96H78 314 aaPredicted RBP16.06■□□□□ 0.16
LINC01238-205ENST00000567549 MOGAT1Q96PD6 335 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 ARHGDIGQ99819 225 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF385DQ9H6B1 395 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 SLC52A3Q9NQ40 469 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 GLTPQ9NZD2 209 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF229Q9UJW7 825 aa16.06■□□□□ 0.16
LINC01238-205ENST00000567549 C11orf98E9PRG8 122 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 IFNA14P01570 189 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 MT-ND5P03915 603 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 SERPINA5P05154 406 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 UMPSP11172 480 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF35P13682 527 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 GIPRP48546 466 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF84P51523 738 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 MRPS11P82912 194 aaKnown RBP16.05■□□□□ 0.16
LINC01238-205ENST00000567549 PLP2Q04941 152 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 PIGFQ07326 219 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 NFYCQ13952 458 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 NPTX1Q15818 432 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 SLC36A2Q495M3 483 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 ENTPD8Q5MY95 495 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 CDK20Q8IZL9 346 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 ARIH2OSQ8N7S6 290 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 ADAMTS16Q8TE57 1224 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 SNX33Q8WV41 574 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 RDH5Q92781 318 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 CGREF1Q99674 301 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 ZNF416Q9BWM5 594 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 POLR2J2Q9GZM3 115 aaKnown RBP16.05■□□□□ 0.16
LINC01238-205ENST00000567549 POLR2J3Q9H1A7 115 aaKnown RBP16.05■□□□□ 0.16
LINC01238-205ENST00000567549 KCNN2Q9H2S1 579 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 NPHS2Q9NP85 383 aa16.05■□□□□ 0.16
LINC01238-205ENST00000567549 TMEFF2Q9UIK5 374 aaPredicted RBP16.05■□□□□ 0.16
LINC01238-205ENST00000567549 A0A1W2PPW3 197 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 TMEM129A0AVI4 362 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 CPSF4LA6NMK7 179 aaKnown RBP16.04■□□□□ 0.16
LINC01238-205ENST00000567549 CENPBD1B2RD01 187 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 B4DSR2 109 aa16.04■□□□□ 0.16
LINC01238-205ENST00000567549 M0QX08 132 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms