RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 VSTM5A8MXK1 200 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 SASH3O75995 380 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 OR6A2O95222 327 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 APEHP13798 732 aaKnown RBP15.8■□□□□ 0.12
USB1-213ENST00000566292 IGFBP5P24593 272 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 GIPRP48546 466 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 PTDSS1P48651 473 aaKnown RBP15.8■□□□□ 0.12
USB1-213ENST00000566292 MELKQ14680 651 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 TRMT5Q32P41 509 aaKnown RBP15.8■□□□□ 0.12
USB1-213ENST00000566292 IQCCQ4KMZ1 466 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 RABL3Q5HYI8 236 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 INTS11Q5TA45 600 aaKnown RBP15.8■□□□□ 0.12
USB1-213ENST00000566292 SNX32Q86XE0 403 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 CALHM3Q86XJ0 350 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 OR6X1Q8NH79 312 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 FGFBP3Q8TAT2 258 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 SLC26A7Q8TE54 656 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 NEU4Q8WWR8 484 aaPredicted RBP15.8■□□□□ 0.12
USB1-213ENST00000566292 MPP4Q96JB8 637 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 TMEM120AQ9BXJ8 343 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 BEX2Q9BXY8 128 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 MRPL37Q9BZE1 423 aaKnown RBP15.8■□□□□ 0.12
USB1-213ENST00000566292 CMAHPQ9Y471 501 aa15.8■□□□□ 0.12
USB1-213ENST00000566292 RNF212BA8MTL3 300 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 FXYD1O00168 92 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 RNF13O43567 381 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 ASAH2BP0C7U1 165 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 PATE4P0C8F1 98 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 DAOP14920 347 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 ZNF23P17027 643 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 GIFP27352 417 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 RAB1AP62820 205 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 LRFN4Q6PJG9 635 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 SKA3Q8IX90 412 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 PHC2Q8IXK0 858 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 MRPL24Q96A35 216 aaKnown RBP15.79■□□□□ 0.12
USB1-213ENST00000566292 SOX7Q9BT81 388 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 DYNLRB1Q9NP97 96 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 MEPEQ9NQ76 525 aaPredicted RBP15.79■□□□□ 0.12
USB1-213ENST00000566292 GLTPQ9NZD2 209 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 LPAR3Q9UBY5 353 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 ZNF229Q9UJW7 825 aa15.79■□□□□ 0.12
USB1-213ENST00000566292 LOC100289279A0A1B0GTE1 492 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 UBL3O95164 117 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 ADRA2AP08913 450 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 TNFRSF1BP20333 461 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 CYLC2Q14093 348 aaPredicted RBP15.78■□□□□ 0.12
USB1-213ENST00000566292 RAB39AQ14964 217 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 FAM166AQ6J272 317 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 PIWIL3Q7Z3Z3 882 aaKnown RBP15.78■□□□□ 0.12
USB1-213ENST00000566292 ZNF584Q8IVC4 421 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 ZNF540Q8NDQ6 660 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 RASSF5Q8WWW0 418 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 ZNF566Q969W8 418 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 SLC25A44Q96H78 314 aaPredicted RBP15.78■□□□□ 0.12
USB1-213ENST00000566292 SLC19A3Q9BZV2 496 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 SHARPINQ9H0F6 387 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 TPK1Q9H3S4 243 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 DENND2DQ9H6A0 471 aaPredicted RBP15.78■□□□□ 0.12
USB1-213ENST00000566292 CHODLQ9H9P2 273 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 ARGLU1Q9NWB6 273 aaPredicted RBP15.78■□□□□ 0.12
USB1-213ENST00000566292 KCNS2Q9ULS6 477 aa15.78■□□□□ 0.12
USB1-213ENST00000566292 LRP5LA4QPB2 252 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 RAB36O95755 333 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 ERCC1P07992 297 aaPredicted RBP15.77■□□□□ 0.12
USB1-213ENST00000566292 PGA4P0DJD7 388 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 PGA3P0DJD8 388 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 GLRXP35754 106 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 EVX1P49640 407 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 UGT2B15P54855 530 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 FXNQ16595 210 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 CGB2Q6NT52 195 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 IL17RELQ6ZVW7 336 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 CARM1Q86X55 608 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 ZNF786Q8N393 782 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 SLC22A24Q8N4F4 322 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 UBASH3BQ8TF42 649 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 LRRC58Q96CX6 371 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 TMEM38BQ9NVV0 291 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 SH3GLB1Q9Y371 365 aa15.77■□□□□ 0.12
USB1-213ENST00000566292 LYNX1G3V0Z9 82 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 BLOC1S5-TXNDC5H3BN57 136 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 PHF1O43189 567 aaPredicted RBP15.76■□□□□ 0.11
USB1-213ENST00000566292 DHHO43323 396 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 SHOX2O60902 331 aaPredicted RBP15.76■□□□□ 0.11
USB1-213ENST00000566292 LILRA1O75019 489 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 HIST1H2ABP04908 130 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 TACSTD2P09758 323 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 LYNX1P0DP58 116 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 UMPSP11172 480 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 IL2RGP31785 369 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 RUNX1T1Q06455 604 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 SF3A3Q12874 501 aaKnown RBP eCLIP15.76■□□□□ 0.11
USB1-213ENST00000566292 KLF10Q13118 480 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 RIN1Q13671 783 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 REP15Q6BDI9 236 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 HIST3H2AQ7L7L0 130 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 NANOGNBQ7Z5D8 188 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 LRP11Q86VZ4 500 aa15.76■□□□□ 0.11
USB1-213ENST00000566292 NKAIN4Q8IVV8 208 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms