RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CCT8L2Q96SF2 557 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 CRLF2Q9HC73 371 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 USP22Q9UPT9 525 aa13.88□□□□□ -0.19
LMX1B-204ENST00000561065 SAMD4AQ9UPU9 718 aaKnown RBP13.88□□□□□ -0.19
LMX1B-204ENST00000561065 A0A1W2PRG6 482 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 KIAA1324LA8MWY0 1029 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-204ENST00000561065 BLOC1S5-TXNDC5H3BN57 136 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 NME4O00746 187 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 NR2C1P13056 603 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 ITGA2P17301 1181 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 APOBEC3AP31941 199 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-204ENST00000561065 PIN1Q13526 163 aaPredicted RBP13.87□□□□□ -0.19
LMX1B-204ENST00000561065 KRT72Q14CN4 511 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 TRAM2Q15035 370 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 SWI5Q1ZZU3 235 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 ANKDD1AQ495B1 522 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 CARD17Q5XLA6 110 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 GLYATQ6IB77 296 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 CBLL1Q75N03 491 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 NANOGNBQ7Z5D8 188 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 IL17RDQ8NFM7 739 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 SGTBQ96EQ0 304 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 TXNDC15Q96J42 360 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 PRRC1Q96M27 445 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 ZNF426Q9BUY5 554 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 KATNB1Q9BVA0 655 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 NDEL1Q9GZM8 345 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 NOX3Q9HBY0 568 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 ABCD2Q9UBJ2 740 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 POFUT2Q9Y2G5 429 aa13.87□□□□□ -0.19
LMX1B-204ENST00000561065 SLC35F4A4IF30 521 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 M0R3G1 203 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 KPNA4O00629 521 aaPredicted RBP13.86□□□□□ -0.19
LMX1B-204ENST00000561065 GPRIN2O60269 458 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 FAM107AO95990 144 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 BCL10O95999 233 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 SERPINA1P01009 418 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 FUT1P19526 365 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 C3orf36Q3SXR2 165 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 C20orf196Q8IYI0 205 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 PGAM4Q8N0Y7 254 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 FAM169BQ8N8A8 192 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 CCDC197Q8NCU1 140 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 NANOS1Q8WY41 292 aaKnown RBP13.86□□□□□ -0.19
LMX1B-204ENST00000561065 POP5Q969H6 163 aaKnown RBP13.86□□□□□ -0.19
LMX1B-204ENST00000561065 FBXO17Q96EF6 278 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 SORCS2Q96PQ0 1159 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 ANKRD19PQ9H560 264 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 KRCC1Q9NPI7 259 aaPredicted RBP13.86□□□□□ -0.19
LMX1B-204ENST00000561065 CA10Q9NS85 328 aa13.86□□□□□ -0.19
LMX1B-204ENST00000561065 ZNF99A8MXY4 864 aaPredicted RBP13.85□□□□□ -0.19
LMX1B-204ENST00000561065 C11orf98E9PRG8 122 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 MGRN1O60291 552 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 SERPINI2O75830 405 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 CRYAAP02489 173 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 TNFRSF1BP20333 461 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 DAP3P51398 398 aaKnown RBP13.85□□□□□ -0.19
LMX1B-204ENST00000561065 IDH3GP51553 393 aaPredicted RBP13.85□□□□□ -0.19
LMX1B-204ENST00000561065 SMIM11AP58511 58 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 PPP2R2BQ00005 443 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 HGFACQ04756 655 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 ADIPOQQ15848 244 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 SLC35D2Q76EJ3 337 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 MDP1Q86V88 176 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 ARHGAP24Q8N264 748 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 OR6X1Q8NH79 312 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 LIPHQ8WWY8 451 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 ZNF566Q969W8 418 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 MCUR1Q96AQ8 359 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 SLC25A44Q96H78 314 aaPredicted RBP13.85□□□□□ -0.19
LMX1B-204ENST00000561065 PRSS27Q9BQR3 290 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 DENND2DQ9H6A0 471 aaPredicted RBP13.85□□□□□ -0.19
LMX1B-204ENST00000561065 GORASP2Q9H8Y8 452 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 ZNF224Q9NZL3 707 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 MAGEL2Q9UJ55 1249 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 FBXL3Q9UKT7 428 aa13.85□□□□□ -0.19
LMX1B-204ENST00000561065 CENPBD1B2RD01 187 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 MCIDASD6RGH6 385 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 CD5LO43866 347 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 OR7A10O76100 309 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 ASAH2BP0C7U1 165 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 HSD17B1P14061 328 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 IFNGR1P15260 489 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 CBR1P16152 277 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 CSNK1A1P48729 337 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 CAMK2DQ13557 499 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 RAB35Q15286 201 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 VHLLQ6RSH7 139 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 CLEC2AQ6UVW9 174 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 OFCC1Q8IZS5 231 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 LRRC17Q8N6Y2 441 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 FNDC8Q8TC99 324 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 NSL1Q96IY1 281 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 RHNO1Q9BSD3 238 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 ULBP2Q9BZM5 246 aa13.84□□□□□ -0.19
LMX1B-204ENST00000561065 FBXO9Q9UK97 447 aaPredicted RBP13.84□□□□□ -0.19
LMX1B-204ENST00000561065 FBN1P35555 2871 aaKnown RBP13.84□□□□□ -0.19
LMX1B-204ENST00000561065 RTTNQ86VV8 2226 aa13.83□□□□□ -0.19
LMX1B-204ENST00000561065 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.2
LMX1B-204ENST00000561065 SHOX2O60902 331 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms