RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 EXOSC2Q13868 293 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 CRMP1Q14194 572 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZNF234Q14588 700 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 INSL4Q14641 139 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MFSD13AQ14CX5 517 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ARHGEF6Q15052 776 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CDK5R1Q15078 307 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LTB4RQ15722 352 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MAPK14Q16539 360 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NTRK2Q16620 822 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 IZUMO4Q1ZYL8 232 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 GSG1Q2KHT4 349 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ARHGAP11BQ3KRB8 267 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC36A2Q495M3 483 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CDONQ4KMG0 1287 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 UBE2NLQ5JXB2 153 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CLEC12AQ5QGZ9 265 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SPOUT1Q5T280 376 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 IDNKQ5T6J7 187 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 FAM69AQ5T7M9 428 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 FAM27D1Q5T7N8 215 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 BCL2L15Q5TBC7 163 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 FAM205BPQ63HN1 556 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC22A10Q63ZE4 541 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZNF57Q68EA5 555 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 TBC1D3GQ6DHY5 549 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 GPR139Q6DWJ6 353 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ARHGAP11AQ6P4F7 1023 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZNF613Q6PF04 617 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TEX261Q6UWH6 196 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 IL20RBQ6UXL0 311 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 UNQ9370/PRO34162Q6UXP9 181 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 WDR88Q6ZMY6 472 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 DNM1P46Q6ZS02 220 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 RFPL4BQ6ZWI9 263 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TMPRSS11FQ6ZWK6 438 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 UTS2BQ765I0 119 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 C16orf62Q7Z3J2 963 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SZRD1Q7Z422 152 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 VN1R4Q7Z5H5 301 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TMCO2Q7Z6W1 182 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 DEFB128Q7Z7B8 93 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LHFPL3Q86UP9 236 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 RANBP3LQ86VV4 465 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 AMZ2Q86W34 360 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PAQR7Q86WK9 346 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MEX3DQ86XN8 651 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 NRROSQ86YC3 692 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 GRAMD2AQ8IUY3 354 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CPOQ8IVL8 374 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NRMQ8IXM6 262 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC38A6Q8IZM9 456 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 RNF113BQ8IZP6 322 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 SYS1Q8N2H4 156 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZNF619Q8N2I2 560 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LRRC25Q8N386 305 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 RAB42Q8N4Z0 105 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 EID2Q8N6I1 236 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LRRC17Q8N6Y2 441 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 DNAJC5GQ8N7S2 189 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SAMD12Q8N8I0 201 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACOT4Q8N9L9 421 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SPERTQ8NA61 448 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 POMGNT2Q8NAT1 580 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MFSD9Q8NBP5 474 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SRFBP1Q8NEF9 429 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 FAM71CQ8NEG0 241 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZNF680Q8NEM1 530 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 C17orf47Q8NEP4 570 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR2L3Q8NG85 312 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR7G2Q8NG99 324 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR11H4Q8NGC9 324 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR51G2Q8NGK0 314 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR9A2Q8NGT5 310 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR5J2Q8NH18 312 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR8K5Q8NH50 307 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR56B4Q8NH76 319 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TRMT10AQ8TBZ6 339 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 LRRC20Q8TCA0 184 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NT5CQ8TCD5 201 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ZNF431Q8TF32 576 aaPredicted RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 GIMAP1Q8WWP7 306 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OIT3Q8WWZ8 545 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PMM1Q92871 262 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 KLK6Q92876 244 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC25A38Q96DW6 304 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SMIM19Q96E16 107 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ELP4Q96EB1 424 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SMIM10Q96HG1 83 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 RADILQ96JH8 1075 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SAMD8Q96LT4 415 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NECTIN4Q96NY8 510 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 BBS4Q96RK4 519 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 GFM1Q96RP9 751 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 ABHD1Q96SE0 405 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MCHR1Q99705 422 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NRTNQ99748 197 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 C17orf62Q9BQA9 187 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 TMED9Q9BVK6 235 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACAT2Q9BWD1 397 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms