RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 WFDC6Q9BQY6 131 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 MS4A5Q9H3V2 200 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 ZNF385DQ9H6B1 395 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 CHODLQ9H9P2 273 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 ARGLU1Q9NWB6 273 aaPredicted RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 ZNF229Q9UJW7 825 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 ANK3Q12955 4377 aaKnown RBP10.6□□□□□ -0.71
SPG11-219ENST00000559822 STAB1Q9NY15 2570 aa10.6□□□□□ -0.71
SPG11-219ENST00000559822 FBN1P35555 2871 aaKnown RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 A0A0G2JND7 137 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 SH3PXD2BA1X283 911 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 FARS2O95363 451 aaKnown RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 CH25HO95992 272 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 TGFAP01135 160 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 ADRA2AP08913 450 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 UMPSP11172 480 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 ZNF14P17017 642 aaPredicted RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 IGFBP5P24593 272 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 GIPRP48546 466 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 RAB1AP62820 205 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 ZP4Q12836 540 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 CYLC2Q14093 348 aaPredicted RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 SELPLGQ14242 412 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 NPTX1Q15818 432 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 FAM120AOSQ5T036 256 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 NHLRC1Q6VVB1 395 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 HDDC2Q7Z4H3 204 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 NANOGNBQ7Z5D8 188 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 RETREG3Q86VR2 466 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 CDK20Q8IZL9 346 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 ZNF786Q8N393 782 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 GPR32P1Q8NGA4 272 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 OR10A6Q8NH74 314 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 VANGL1Q8TAA9 524 aaPredicted RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 UBASH3BQ8TF42 649 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 HPS1Q92902 700 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 ZNF566Q969W8 418 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 MRPL24Q96A35 216 aaKnown RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 THOC1Q96FV9 657 aaKnown RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 SLC25A44Q96H78 314 aaPredicted RBP10.59□□□□□ -0.71
SPG11-219ENST00000559822 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 PCDHAC1Q9H158 963 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 VIPAS39Q9H9C1 493 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 NPHS2Q9NP85 383 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 GLTPQ9NZD2 209 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 SLC7A8Q9UHI5 535 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 SLC7A7Q9UM01 511 aa10.59□□□□□ -0.71
SPG11-219ENST00000559822 TMEM129A0AVI4 362 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 EDF1O60869 148 aaKnown RBP10.58□□□□□ -0.72
SPG11-219ENST00000559822 TACSTD2P09758 323 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 OR8G3PP0DMU2 310 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 ZNF35P13682 527 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 VMACQ2NL98 169 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 CCDC80Q76M96 950 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 PHC2Q8IXK0 858 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 SLC22A24Q8N4F4 322 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 TMEM54Q969K7 222 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 ZNF75AQ96N20 296 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 ZNF426Q9BUY5 554 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 POLR2J2Q9GZM3 115 aaKnown RBP10.58□□□□□ -0.72
SPG11-219ENST00000559822 POLR2J3Q9H1A7 115 aaKnown RBP10.58□□□□□ -0.72
SPG11-219ENST00000559822 C1orf198Q9H425 327 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 REV1Q9UBZ9 1251 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 BAG5Q9UL15 447 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 ZNF346Q9UL40 294 aaKnown RBP10.58□□□□□ -0.72
SPG11-219ENST00000559822 FBN3Q75N90 2809 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPG11-219ENST00000559822 MALRD1Q5VYJ5 2156 aa10.58□□□□□ -0.72
SPG11-219ENST00000559822 SLC22A23A1A5C7 686 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 CENPBD1B2RD01 187 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 KPNA4O00629 521 aaPredicted RBP10.57□□□□□ -0.72
SPG11-219ENST00000559822 MGRN1O60291 552 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 BCL10O95999 233 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 NPPAP01160 153 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 PTHP01270 115 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 IFNA14P01570 189 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 IGHG1P01857 330 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 SERPINA5P05154 406 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 ASAH2BP0C7U1 165 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 PCMT1P22061 227 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 APEX1P27695 318 aaKnown RBP10.57□□□□□ -0.72
SPG11-219ENST00000559822 RBM34P42696 430 aaKnown RBP10.57□□□□□ -0.72
SPG11-219ENST00000559822 CLRN1P58418 232 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 SELENOVP59797 346 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 SLC36A2Q495M3 483 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 MMEL1Q495T6 779 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 NRN1LQ496H8 165 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 COQ5Q5HYK3 327 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 ERICH5Q6P6B1 374 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 WDR88Q6ZMY6 472 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 RBM45Q8IUH3 476 aaKnown RBP10.57□□□□□ -0.72
SPG11-219ENST00000559822 ZCCHC24Q8N2G6 241 aaKnown RBP10.57□□□□□ -0.72
SPG11-219ENST00000559822 LINC01356Q8N9X3 169 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 TAMM41Q96BW9 452 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 ECSITQ9BQ95 431 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 MRPL37Q9BZE1 423 aaKnown RBP10.57□□□□□ -0.72
SPG11-219ENST00000559822 TMEM38BQ9NVV0 291 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 TAS2R5Q9NYW4 299 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 ZNF224Q9NZL3 707 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms