RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 H3BUI4 141 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 GOSR2O14653 212 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 APBB3O95704 486 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 OR8G3PP0DMU2 310 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 MGMTP16455 207 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 NAT1P18440 290 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 LTBRP36941 435 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 RPS15P62841 145 aaKnown RBP14.82□□□□□ -0.04
SHMT2-232ENST00000557487 ZNF660Q6AZW8 331 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-232ENST00000557487 FDX2Q6P4F2 183 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 CSNK1A1LQ8N752 337 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 ZNF454Q8N9F8 522 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 C7orf57Q8NEG2 295 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 C3orf49Q96BT1 292 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 WDR92Q96MX6 357 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 OR1F2PQ96R84 312 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 SLC25A21Q9BQT8 299 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-232ENST00000557487 MFFQ9GZY8 342 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 SLC6A15Q9H2J7 730 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 WDR76Q9H967 626 aa14.82□□□□□ -0.04
SHMT2-232ENST00000557487 TMEM72A0PK05 275 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 OR6C74A6NCV1 312 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 PRR32B1ATL7 298 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 ATP6V1G2-DDX39BF2Z307 99 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 TNFRSF10CO14798 259 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 CTAG2O75638 210 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 HPP00738 406 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 POU3F2P20265 443 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-232ENST00000557487 PRSS3P35030 304 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 ACTR1BP42025 376 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 CDKN2AP42771 156 aaKnown RBP14.81□□□□□ -0.04
SHMT2-232ENST00000557487 ADPRHP54922 357 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 ACTR1AP61163 376 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 CCINQ13939 588 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 CLVS2Q5SYC1 327 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 LPCAT3Q6P1A2 487 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 ENPP7Q6UWV6 458 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 MUC20Q8N307 709 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-232ENST00000557487 LRRC75AQ8NAA5 344 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 OR52B4Q8NGK2 314 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 OR2G2Q8NGZ5 317 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 ZPLD1Q8TCW7 415 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 HMGB4Q8WW32 186 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 FAM3CQ92520 227 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 MCHR2Q969V1 340 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 POTEKPQ9BYX7 375 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 SLCO5A1Q9H2Y9 848 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 IGFLR1Q9H665 355 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 LAMP5Q9UJQ1 280 aa14.81□□□□□ -0.04
SHMT2-232ENST00000557487 A0A0J9YY10 115 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ELOA3DA6NLF2 546 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-232ENST00000557487 PRAMEF2O60811 474 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 RPP14O95059 124 aaKnown RBP14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ITGB2P05107 769 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 GTF2F2P13984 249 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 MPGP29372 298 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ZNF74Q16587 644 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ELOA3BQ3SY89 546 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 STPG1Q5TH74 334 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 WBP2NLQ6ICG8 309 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 PRSS41Q7RTY9 318 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 STPG2Q8N412 459 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ZNF676Q8N7Q3 588 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ZNF511Q8NB15 262 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ELOA3Q8NG57 546 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 OR5T3Q8NGG3 340 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 Q96M85 177 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 SCPEP1Q9HB40 452 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 TMEM138Q9NPI0 162 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 TBC1D3DA0A087WVF3 549 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 TBC1D3LB9A6J9 549 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 GNB5O14775 395 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 LINC01565O15544 149 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 TBC1D3HP0C7X1 549 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 FCARP24071 287 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ADH7P40394 386 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 SOX2P48431 317 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 SKP1P63208 163 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 SRSF4Q08170 494 aaKnown RBP14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ITPRIPL2Q3MIP1 535 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ALG10Q5BKT4 473 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 OR7E24Q6IFN5 339 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 TBC1D3CQ6IPX1 549 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 C11orf88Q6PI97 169 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 MCATQ8IVS2 390 aaKnown RBP14.8□□□□□ -0.04
SHMT2-232ENST00000557487 TMEFF1Q8IYR6 380 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 TBC1D3Q8IZP1 549 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-232ENST00000557487 OR5T2Q8NGG2 359 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 OR52H1Q8NGJ2 320 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 OR10G6Q8NH81 332 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ADAMTS18Q8TE60 1221 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 ARSGQ96EG1 525 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 DCBLD2Q96PD2 775 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 EXO5Q9H790 373 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 EXOSC3Q9NQT5 275 aaKnown RBP14.8□□□□□ -0.04
SHMT2-232ENST00000557487 CLEC1BQ9P126 229 aa14.8□□□□□ -0.04
SHMT2-232ENST00000557487 LOC100289279A0A1B0GTE1 492 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 PSMD9O00233 223 aa14.79□□□□□ -0.04
SHMT2-232ENST00000557487 SLC31A1O15431 190 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms