RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CHODLQ9H9P2 273 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 ZNF224Q9NZL3 707 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 ZNF229Q9UJW7 825 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 FBXL3Q9UKT7 428 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 SPEF1Q9Y4P9 236 aa12.24□□□□□ -0.45
SNX6-210ENST00000557341 LOC100289279A0A1B0GTE1 492 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 SH3PXD2BA1X283 911 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 RNF13O43567 381 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 ENTPD5O75356 428 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 STAMBPO95630 424 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 CH25HO95992 272 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 THY1P04216 161 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 UMPSP11172 480 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 NR4A1P22736 598 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 RPS23P62266 143 aaKnown RBP12.23□□□□□ -0.45
SNX6-210ENST00000557341 GALK2Q01415 458 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 ZP4Q12836 540 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 MELKQ14680 651 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 VMACQ2NL98 169 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 SLC35D2Q76EJ3 337 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 NANOGNBQ7Z5D8 188 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 RBM45Q8IUH3 476 aaKnown RBP12.23□□□□□ -0.45
SNX6-210ENST00000557341 OR6X1Q8NH79 312 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 TMEM54Q969K7 222 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 ZNF566Q969W8 418 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 MRPL24Q96A35 216 aaKnown RBP12.23□□□□□ -0.45
SNX6-210ENST00000557341 MSI2Q96DH6 328 aaKnown RBP12.23□□□□□ -0.45
SNX6-210ENST00000557341 ZNF75AQ96N20 296 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 ZNF426Q9BUY5 554 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 MRGBPQ9NV56 204 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 GLTPQ9NZD2 209 aa12.23□□□□□ -0.45
SNX6-210ENST00000557341 TMEM129A0AVI4 362 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 M0R233 179 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 PHF1O43189 567 aaPredicted RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 LYPD3O95274 346 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 HIST1H2ABP04908 130 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 ZNF35P13682 527 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 SRD5A1P18405 259 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 HNF1AP20823 631 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 GIFP27352 417 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 LSP1P33241 339 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 GLRXP35754 106 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 GIPRP48546 466 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 EVX1P49640 407 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 CHN2P52757 468 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 CRYBA2P53672 197 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 RAB1AP62820 205 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 CYLC2Q14093 348 aaPredicted RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 GKAP1Q5VSY0 366 aaPredicted RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 CCDC80Q76M96 950 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 HIST3H2AQ7L7L0 130 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 PIWIL3Q7Z3Z3 882 aaKnown RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 TSPYL5Q86VY4 417 aaPredicted RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 PHC2Q8IXK0 858 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 ZCCHC24Q8N2G6 241 aaKnown RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 ARIH2OSQ8N7S6 290 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 HIST1H2ACQ93077 130 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 SLC25A44Q96H78 314 aaPredicted RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 SH3GL1Q99961 368 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 TMEM120AQ9BXJ8 343 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 MRPL37Q9BZE1 423 aaKnown RBP12.22□□□□□ -0.45
SNX6-210ENST00000557341 TPK1Q9H3S4 243 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 TAS2R5Q9NYW4 299 aa12.22□□□□□ -0.45
SNX6-210ENST00000557341 TANC2Q9HCD6 1990 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 FBP2O00757 339 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 SYNGR3O43761 229 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 IGFBP1P08833 259 aaPredicted RBP12.21□□□□□ -0.45
SNX6-210ENST00000557341 ADRA2AP08913 450 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 ASAH2BP0C7U1 165 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 PGA4P0DJD7 388 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 PGA3P0DJD8 388 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 GZMMP51124 257 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 MMEL1Q495T6 779 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 NANOGP8Q6NSW7 305 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 ZNF786Q8N393 782 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 SLC22A24Q8N4F4 322 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 LRRC17Q8N6Y2 441 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 OR8J3Q8NGG0 315 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 UBASH3BQ8TF42 649 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 NANOGQ9H9S0 305 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 SLC7A8Q9UHI5 535 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 SH3GLB1Q9Y371 365 aa12.21□□□□□ -0.45
SNX6-210ENST00000557341 LRP5LA4QPB2 252 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 BBIP1A8MTZ0 92 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 FXYD1O00168 92 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 FARS2O95363 451 aaKnown RBP12.2□□□□□ -0.46
SNX6-210ENST00000557341 TGFAP01135 160 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 IGHG1P01857 330 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 MT-ND1P03886 318 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 TACSTD2P09758 323 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 TROVE2P10155 538 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNX6-210ENST00000557341 H2AFXP16104 143 aaPredicted RBP12.2□□□□□ -0.46
SNX6-210ENST00000557341 RBM34P42696 430 aaKnown RBP12.2□□□□□ -0.46
SNX6-210ENST00000557341 CLRN1P58418 232 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 TAS2R41P59536 307 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 RAB39AQ14964 217 aa12.2□□□□□ -0.46
SNX6-210ENST00000557341 FXNQ16595 210 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms