RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SLC2A5P22732 501 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 EEF1B2P24534 225 aaKnown RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 ACVR2AP27037 513 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 PYCR1P32322 319 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 SLC16A1P53985 500 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 CDH11P55287 796 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 CAMK2DQ13557 499 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 APOFQ13790 326 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 SLC17A1Q14916 467 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 OCLNQ16625 522 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 SOWAHCQ53LP3 525 aaPredicted RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 ABLIM2Q6H8Q1 611 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 FCRLAQ7L513 359 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 JAZF1Q86VZ6 243 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 DOLPP1Q86YN1 238 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 C9orf106Q8NAJ2 232 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 ZNF540Q8NDQ6 660 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 OR9K2Q8NGE7 335 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 GGHQ92820 318 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 ZNF566Q969W8 418 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 OXGR1Q96P68 337 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 ERVK-18Q9QC07 812 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 CLCF1Q9UBD9 225 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 NCOA6Q14686 2063 aaPredicted RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 COL12A1Q99715 3063 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 SLC35F4A4IF30 521 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 CCDC182A6NF36 153 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 PYCARD-AS1I3L0S3 204 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 BCL10O95999 233 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 IFNGP01579 166 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 MRPL3P09001 348 aaKnown RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 ZNF43P17038 809 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 C21orf33P30042 268 aaPredicted RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 CLDN17P56750 224 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 SLC35A2P78381 396 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 FOXF2Q12947 444 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 C1DQ13901 141 aaKnown RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 ETFDHQ16134 617 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 ACSF3Q4G176 576 aaPredicted RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 RBM48Q5RL73 367 aaKnown RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 CREB3L2Q70SY1 520 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 GCNT2Q8N0V5 402 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 CPNE4Q96A23 557 aaPredicted RBP9.56□□□□□ -0.88
TDP1-211ENST00000555178 WBP1Q96G27 269 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 PSORS1C1Q9UIG5 152 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 CACNA1CQ13936 2221 aa9.56□□□□□ -0.88
TDP1-211ENST00000555178 PRSS37A4D1T9 235 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 MAGEA13PA6NCF6 341 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 TRIM64A6NGJ6 449 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 XKRYO14609 159 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 PRODHO43272 600 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 IDH3BO43837 385 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 STSP08842 583 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 CCDC159P0C7I6 412 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SFTPCP11686 197 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SPI1P17947 270 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SELENOPP49908 381 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 RPS7P62081 194 aaKnown RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 KCTD21Q4G0X4 260 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 KRTCAP3Q53RY4 240 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 PHYHD1Q5SRE7 291 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SLC25A30Q5SVS4 291 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 NXNL2Q5VZ03 156 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 GPR139Q6DWJ6 353 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 GTF2IRD2BQ6EKJ0 949 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 GTF2IRD2Q86UP8 949 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 TUSC5Q8IXB3 177 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 OR6V1Q8N148 313 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 NAXEQ8NCW5 288 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 OR4F15Q8NGB8 312 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 FAM57AQ8TBR7 257 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 RNF128Q8TEB7 428 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 HTRA1Q92743 480 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SARAFQ96BY9 339 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 ZMYND19Q96E35 227 aaPredicted RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 ZHX1-C8orf76Q96EF9 292 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 NAA11Q9BSU3 229 aaPredicted RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 NMNAT2Q9BZQ4 307 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 NUAK2Q9H093 628 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SRA1Q9HD15 236 aaKnown RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 KLHL21Q9UJP4 597 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 RASD1Q9Y272 281 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 ZNF835Q9Y2P0 537 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 NOX1Q9Y5S8 564 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 RTTNQ86VV8 2226 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 FAM208BQ5VWN6 2430 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 CYTIPO60759 359 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SLC19A2O60779 497 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 TRMUO75648 421 aaKnown RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 UTP20O75691 2785 aaKnown RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 CTLA4P16410 223 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 GSTT1P30711 240 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 SLC15A1P46059 708 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 UQCRFS1P47985 274 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 DAP3P51398 398 aaKnown RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 CXCR4P61073 352 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 DOC2BQ14184 412 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 TMEM154Q6P9G4 183 aa9.55□□□□□ -0.88
TDP1-211ENST00000555178 NUFIP2Q7Z417 695 aaKnown RBP9.55□□□□□ -0.88
TDP1-211ENST00000555178 ADGRG4Q8IZF6 3080 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms