RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SELENOVP59797 346 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 NAA20P61599 178 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 RPS23P62266 143 aaKnown RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 MRPS25P82663 173 aaKnown RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 ARF1P84077 181 aaKnown RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 SRSF4Q08170 494 aaKnown RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 NPRL3Q12980 569 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PDE7AQ13946 482 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 GPR68Q15743 365 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PCGF3Q3KNV8 242 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 SPDYE7PQ495Y7 208 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 AVPI1Q5T686 147 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 KRT80Q6KB66 452 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 R3HCC1LQ7Z5L2 792 aaKnown RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 SLC22A9Q8IVM8 553 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 NATD1Q8N6N6 113 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 KIR3DL3Q8N743 410 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 TMEM99Q8N816 258 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 OR4F5Q8NH21 305 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PSMA8Q8TAA3 256 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 OIT3Q8WWZ8 545 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 OR5P2Q8WZ92 322 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 RAB1CQ92928 201 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 RAB8BQ92930 207 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 MOAP1Q96BY2 351 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 DNAJA3Q96EY1 480 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 TIMD4Q96H15 378 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 C1orf147Q96MC9 270 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 TMEM237Q96Q45 408 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 CCT7Q99832 543 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 CITED1Q99966 193 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 RBM4BQ9BQ04 359 aaKnown RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 LINC00470Q9BZP3 86 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 NOX3Q9HBY0 568 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 MID1IP1Q9NPA3 183 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 SIRT3Q9NTG7 399 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-229ENST00000554672 C1orf109Q9NX04 203 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 ZNF69Q9UC07 566 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 ZDHHC2Q9UIJ5 367 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 KCNE5Q9UJ90 142 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PRDM4Q9UKN5 801 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 SLC35A3Q9Y2D2 325 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 TMED7Q9Y3B3 224 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 CCL27Q9Y4X3 112 aa4.09□□□□□ -1.75
ATXN3-229ENST00000554672 PRKDCP78527 4128 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TMEM72A0PK05 275 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 LIPT2A6NK58 231 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 AQP7P3A6NL99 342 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 FOXH1O75593 365 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF432O94892 652 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 AKR7A3O95154 331 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 CRYBA1P05813 215 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 GUSBP08236 651 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 GSTA1P08263 222 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 BCKDHAP12694 445 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF35P13682 527 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 EFNA1P20827 205 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MATN1P21941 496 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 OMGP23515 440 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 RPL3P39023 403 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 CAPZA2P47755 286 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 IDH2P48735 452 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 POLR2HP52434 150 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 FOXA1P55317 472 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 BLOC1S1P78537 153 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 GALK2Q01415 458 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ROR2Q01974 943 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 CEACAM7Q14002 265 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 HLXQ14774 488 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MAD2L1BPQ15013 274 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MAPK14Q16539 360 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TAF9Q16594 264 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MOGQ16653 247 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 GSTA3Q16772 222 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TRMT5Q32P41 509 aaKnown RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ARHGAP11BQ3KRB8 267 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 GLIPR1L2Q4G1C9 344 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ARMCX4Q5H9R4 360 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ARFGEF3Q5TH69 2177 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 GKAP1Q5VSY0 366 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 PRAMEF8Q5VWM4 474 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 PRAMEF7Q5VXH5 474 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 OLFML2AQ68BL7 652 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ASPHD2Q6ICH7 369 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 NIPAL3Q6P499 406 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 TMEM154Q6P9G4 183 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 EMBQ6PCB8 327 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 SYT10Q6XYQ8 523 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 LHFPL2Q6ZUX7 228 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 LINGO2Q7L985 606 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 GPAT4Q86UL3 456 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MDP1Q86V88 176 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 MYPOPQ86VE0 399 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-229ENST00000554672 LCA5Q86VQ0 697 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 LRP11Q86VZ4 500 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 WDFY1Q8IWB7 410 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 ARFGAP2Q8N6H7 521 aa4.08□□□□□ -1.76
ATXN3-229ENST00000554672 FAM71CQ8NEG0 241 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms