RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 LY6G6FQ5SQ64 297 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF658Q5TYW1 1059 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 GPR107Q5VW38 600 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 MEDAGQ5VYS4 303 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 STUMQ69YW2 141 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 REEP3Q6NUK4 255 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 FAHD2BQ6P2I3 314 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 ASCL4Q6XD76 172 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 HDDC2Q7Z4H3 204 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 FBXO16Q8IX29 292 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 SELENOHQ8IZQ5 122 aaKnown RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 C17orf78Q8N4C9 275 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 C15orf54Q8N8G6 183 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 LRRC75AQ8NAA5 344 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 INO80EQ8NBZ0 244 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 OR7G1Q8NGA0 311 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 OR10H4Q8NGA5 316 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 PLPPR1Q8TBJ4 325 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 FAM131CQ96AQ9 280 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 FAHD2AQ96GK7 314 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 ALS2CR12Q96Q35 445 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 XPO6Q96QU8 1125 aaKnown RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 NAPGQ99747 312 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 SH3GL1Q99961 368 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 RAB34Q9BZG1 259 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 RACGAP1Q9H0H5 632 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 NIPAL2Q9H841 368 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 EXOSC3Q9NQT5 275 aaKnown RBP3.63□□□□□ -1.83
SCFD1-211ENST00000554437 ZC4H2Q9NQZ6 224 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 IL17CQ9P0M4 197 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 PDE10AQ9Y233 779 aa3.63□□□□□ -1.83
SCFD1-211ENST00000554437 IQANK1A0A1B0GTG1 560 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 A0A1W2PRD5 423 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 SIRPB1O00241 398 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 OR10H3O60404 316 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 FCN3O75636 299 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 NOL4O94818 638 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 IGHG4P01861 327 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ALDOBP05062 364 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 DCNP07585 359 aaKnown RBP3.62□□□□□ -1.83
SCFD1-211ENST00000554437 P0C879 139 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 PMCHP20382 165 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 CFHR2P36980 270 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 MAP3K8P41279 467 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 P2RY4P51582 365 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ATP5J2P56134 94 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ERVK-25P63136 954 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 CSNK1G2P78368 415 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 SIGLEC14Q08ET2 396 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 STX3Q13277 289 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 MAPRE2Q15555 327 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF79Q15937 498 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 PSG3Q16557 428 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 PTPN20Q4JDL3 420 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 PAGE2BQ5JRK9 111 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ZNF470Q6ECI4 717 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 OR8G2PQ6IF36 304 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 BHLHA15Q7RTS1 189 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-211ENST00000554437 PID1Q7Z2X4 250 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 CYP4Z1Q86W10 505 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 APOBEC3FQ8IUX4 373 aaKnown RBP3.62□□□□□ -1.83
SCFD1-211ENST00000554437 NELFCDQ8IXH7 590 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 JAGN1Q8N5M9 183 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 KIR3DL3Q8N743 410 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ATP6V0D2Q8N8Y2 350 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 OR52E5Q8NH55 327 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 PHYHIPLQ96FC7 376 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 TSSK3Q96PN8 268 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 PSTPIP2Q9H939 334 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ABCB10Q9NRK6 738 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 ELOVL2Q9NXB9 296 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 EURLQ9NYK6 297 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 NKIRAS1Q9NYS0 192 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 UXTQ9UBK9 157 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-211ENST00000554437 KLHL21Q9UJP4 597 aa3.62□□□□□ -1.83
SCFD1-211ENST00000554437 TRBV9A0A0B4J1U6 114 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 IGHV2-70DA0A0C4DH43 119 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 C1orf232A0A0U1RR37 186 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 A0A1B0GUS0 222 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 PFKFB2O60825 505 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 HSBP1O75506 76 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 CCNB2O95067 398 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 FARS2O95363 451 aaKnown RBP3.61□□□□□ -1.83
SCFD1-211ENST00000554437 ETHE1O95571 254 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 TSPAN13O95857 204 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 POLR2EP19388 210 aaKnown RBP3.61□□□□□ -1.83
SCFD1-211ENST00000554437 GABRR2P28476 465 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 CD40LGP29965 261 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 SLC1A1P43005 524 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 ART3Q13508 389 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 LAGE3Q14657 143 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 ISXQ2M1V0 245 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
SCFD1-211ENST00000554437 DCST2Q5T1A1 773 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 C8orf74Q6P047 294 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 TPGS1Q6ZTW0 290 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 ARCQ7LC44 396 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 PLCZ1Q86YW0 608 aa3.61□□□□□ -1.83
SCFD1-211ENST00000554437 APRG1Q8IVJ8 170 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms