RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 INTS9Q9NV88 658 aaKnown RBP16.18■□□□□ 0.18
CPSF2-203ENST00000554290 M0R233 179 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 LILRA1O75019 489 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 HIST1H2ABP04908 130 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 APEX1P27695 318 aaKnown RBP16.17■□□□□ 0.18
CPSF2-203ENST00000554290 GLRXP35754 106 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 GIPRP48546 466 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 MTPNP58546 118 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 ZP4Q12836 540 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 CR1LQ2VPA4 569 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 INTS11Q5TA45 600 aaKnown RBP16.17■□□□□ 0.18
CPSF2-203ENST00000554290 HIST3H2AQ7L7L0 130 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 WDFY1Q8IWB7 410 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 GPR32P1Q8NGA4 272 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 ADAMTS16Q8TE57 1224 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 HIST1H2ACQ93077 130 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 MRPL37Q9BZE1 423 aaKnown RBP16.17■□□□□ 0.18
CPSF2-203ENST00000554290 TPK1Q9H3S4 243 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 NANSQ9NR45 359 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 GLTPQ9NZD2 209 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 REV1Q9UBZ9 1251 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 SLC7A7Q9UM01 511 aa16.17■□□□□ 0.18
CPSF2-203ENST00000554290 TRAPPC13A5PLN9 417 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 RNF13O43567 381 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 CH25HO95992 272 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 IGFBP1P08833 259 aaPredicted RBP16.16■□□□□ 0.18
CPSF2-203ENST00000554290 OR8G3PP0DMU2 310 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 RIN1Q13671 783 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 NFYCQ13952 458 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF74Q16587 644 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 KRTAP24-1Q3LI83 254 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 TTMPQ5BVD1 217 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 REP15Q6BDI9 236 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 LINC01356Q8N9X3 169 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 VANGL1Q8TAA9 524 aaPredicted RBP16.16■□□□□ 0.18
CPSF2-203ENST00000554290 RASSF5Q8WWW0 418 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 TMEM54Q969K7 222 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF566Q969W8 418 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 MPP4Q96JB8 637 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 SNX18Q96RF0 628 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 SOX7Q9BT81 388 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 SLC19A3Q9BZV2 496 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 KAT8Q9H7Z6 458 aaKnown RBP16.16■□□□□ 0.18
CPSF2-203ENST00000554290 TAS2R5Q9NYW4 299 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF224Q9NZL3 707 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF229Q9UJW7 825 aa16.16■□□□□ 0.18
CPSF2-203ENST00000554290 FARS2O95363 451 aaKnown RBP16.15■□□□□ 0.18
CPSF2-203ENST00000554290 SERPINA5P05154 406 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 CD247P20963 164 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 SELPLGQ14242 412 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 RAB39AQ14964 217 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 NPTX1Q15818 432 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 WDR88Q6ZMY6 472 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 RETREG3Q86VR2 466 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 RBM45Q8IUH3 476 aaKnown RBP16.15■□□□□ 0.18
CPSF2-203ENST00000554290 SKA3Q8IX90 412 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 SLC22A24Q8N4F4 322 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 THOC1Q96FV9 657 aaKnown RBP16.15■□□□□ 0.18
CPSF2-203ENST00000554290 SLC25A44Q96H78 314 aaPredicted RBP16.15■□□□□ 0.18
CPSF2-203ENST00000554290 MAGEB18Q96M61 343 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 SYT3Q9BQG1 590 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 ZNF385DQ9H6B1 395 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 SLC7A8Q9UHI5 535 aa16.15■□□□□ 0.18
CPSF2-203ENST00000554290 HMGB1P1B2RPK0 211 aaPredicted RBP16.14■□□□□ 0.17
CPSF2-203ENST00000554290 LYNX1G3V0Z9 82 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 DHHO43323 396 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 LYPD3O95274 346 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 LYNX1P0DP58 116 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 UMPSP11172 480 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 PCGF2P35227 344 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 FXNQ16595 210 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 MSMPQ1L6U9 139 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 LIPNQ5VXI9 398 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 DPPA2Q7Z7J5 298 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 OR10A6Q8NH74 314 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 TMEFF2Q9UIK5 374 aaPredicted RBP16.14■□□□□ 0.17
CPSF2-203ENST00000554290 MALRD1Q5VYJ5 2156 aa16.14■□□□□ 0.17
CPSF2-203ENST00000554290 SLC22A23A1A5C7 686 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 KPNA4O00629 521 aaPredicted RBP16.13■□□□□ 0.17
CPSF2-203ENST00000554290 BCL10O95999 233 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 THY1P04216 161 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 PATE4P0C8F1 98 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 TCN1P20061 433 aaPredicted RBP16.13■□□□□ 0.17
CPSF2-203ENST00000554290 PCMT1P22061 227 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 IL2RGP31785 369 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 CDH15P55291 814 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 SELENOVP59797 346 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 METTL21CQ5VZV1 264 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 TMEM53Q6P2H8 277 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 LRFN4Q6PJG9 635 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 NANOGNBQ7Z5D8 188 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 LRRC17Q8N6Y2 441 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 OR4D11Q8NGI4 311 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 RDH5Q92781 318 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 TAMM41Q96BW9 452 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 SIKE1Q9BRV8 207 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 ZNF426Q9BUY5 554 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 C19orf24Q9BVV8 132 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 PCDHAC1Q9H158 963 aa16.13■□□□□ 0.17
CPSF2-203ENST00000554290 RNF121Q9H920 327 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms