RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SMAD9O15198 467 aaKnown RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 RRP8O43159 456 aaKnown RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 ZNF208O43345 1280 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CDC14BO60729 498 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 GPR37L1O60883 481 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 ARL6IP5O75915 188 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 ETHE1O95571 254 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 IGSF6O95976 241 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CSF1P09603 554 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 SLC35G4P0C7Q5 338 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CR2P20023 1033 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CD22P20273 847 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 MAOAP21397 527 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CD34P28906 385 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 TAF6P49848 677 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 RGS8P57771 180 aaPredicted RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 ZNF280AP59817 542 aaPredicted RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 PRKCZQ05513 592 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CNTN1Q12860 1018 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 SYPL1Q16563 259 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 PTRHD1Q6GMV3 140 aaKnown RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 NIPAL3Q6P499 406 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 ZNF620Q6ZNG0 422 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 BIVMQ86UB2 503 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CD163Q86VB7 1156 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CPOQ8IVL8 374 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CLDN19Q8N6F1 224 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 TOP6BLQ8N6T0 577 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 FRMD1Q8N878 549 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 OR4K17Q8NGC6 315 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 RNASEH2CQ8TDP1 164 aaKnown RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 SLC38A5Q8WUX1 472 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 KISS1RQ969F8 398 aaPredicted RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 S100A16Q96FQ6 103 aaKnown RBP8.72□□□□□ -1.01
SIX4-202ENST00000554079 C4orf36Q96KX1 117 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 MRI1Q9BV20 369 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 RAB33BQ9H082 229 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CWH43Q9H720 699 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 BPIFA1Q9NP55 256 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 NRIP3Q9NQ35 241 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 INPP5EQ9NRR6 644 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 OR5V1Q9UGF6 321 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 ADAM18Q9Y3Q7 739 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 DOCK6Q96HP0 2047 aa8.72□□□□□ -1.01
SIX4-202ENST00000554079 CDHR4A6H8M9 788 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 TMEM235A6NFC5 223 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 B4E171 279 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 H7BY64 318 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 LILRB3O75022 631 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 NXPH2O95156 264 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 AKAIN1P0CW23 69 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 RHOQP17081 205 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 TACR3P29371 465 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 PPP2R1BP30154 601 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 RPS11P62280 158 aaKnown RBP eCLIP8.71□□□□□ -1.01
SIX4-202ENST00000554079 NKX6-1P78426 367 aaPredicted RBP8.71□□□□□ -1.01
SIX4-202ENST00000554079 ZNF85Q03923 595 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 UBE2V2Q15819 145 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 PRSS53Q2L4Q9 553 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 ZNF674Q2M3X9 581 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 MS4A13Q5J8X5 152 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 GGNBP1Q5YKI7 109 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 MED27Q6P2C8 311 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 DEGS2Q6QHC5 323 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 TPGS1Q6ZTW0 290 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 TTLL10Q6ZVT0 673 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 GID4Q8IVV7 300 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 CBARPQ8N350 705 aaPredicted RBP8.71□□□□□ -1.01
SIX4-202ENST00000554079 GALNT16Q8N428 558 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 TERB2Q8NHR7 220 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 LYPD6BQ8NI32 183 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 C15orf40Q8WUR7 153 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 AUTS2Q8WXX7 1259 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 ZNF350Q9GZX5 532 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 PARP11Q9NR21 331 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 CUTCQ9NTM9 273 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 FBXO4Q9UKT5 387 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 HS3ST3B1Q9Y662 390 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 SLCO1B1Q9Y6L6 691 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 PRSS21Q9Y6M0 314 aa8.71□□□□□ -1.01
SIX4-202ENST00000554079 A0A087WUU8 490 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 MGAT4DA6NG13 374 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 NPC1O15118 1278 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 HCRTR2O43614 444 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 PRICKLE3O43900 615 aaPredicted RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 SLC25A14O95258 325 aaPredicted RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 GSTP1P09211 210 aaKnown RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 CXCL1P09341 107 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 OR8U9P0C7N5 309 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 TMIGD3P0DMS9 266 aaPredicted RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 ALPPL2P10696 532 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 SOAT1P35610 550 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 ID4P47928 161 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 SULT1A2P50226 295 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 SUCLG1P53597 346 aaKnown RBP8.71□□□□□ -1.02
SIX4-202ENST00000554079 CARD18P57730 90 aa8.71□□□□□ -1.02
SIX4-202ENST00000554079 OR12D2P58182 307 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms