RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KLK7P49862 253 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 SLC25A1P53007 311 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 CRISP1P54107 249 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 RAP1BP61224 184 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 SELENOTP62341 195 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 LCN2P80188 198 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 TRAM2Q15035 370 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 PAN3Q58A45 887 aaKnown RBP4.46□□□□□ -1.7
SCFD1-208ENST00000553278 PAGE2BQ5JRK9 111 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 UNQ9370/PRO34162Q6UXP9 181 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 NAXDQ8IW45 347 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 PUSL1Q8N0Z8 303 aaKnown RBP4.46□□□□□ -1.7
SCFD1-208ENST00000553278 GATSQ8NAP1 163 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 OR4A15Q8NGL6 344 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 AGAP11Q8TF27 550 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 ASZ1Q8WWH4 475 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 ECSITQ9BQ95 431 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 SIAEQ9HAT2 523 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 RETNQ9HD89 108 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 IL26Q9NPH9 171 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 CLEC5AQ9NY25 188 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 WWOXQ9NZC7 414 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 ZNF581Q9P0T4 197 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 DDX19BQ9UMR2 479 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 ING4Q9UNL4 249 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 GOLT1BQ9Y3E0 138 aa4.46□□□□□ -1.7
SCFD1-208ENST00000553278 IGHV3-35A0A0C4DH35 117 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ZG16O60844 167 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 LYPLA1O75608 230 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-208ENST00000553278 EIF3GO75821 320 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCFD1-208ENST00000553278 DCNP07585 359 aaKnown RBP4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ACSM4P0C7M7 580 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 CCNOP22674 350 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 GPR1P46091 355 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ACTA2P62736 377 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ACTG2P63267 376 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ACTC1P68032 377 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ACTA1P68133 377 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 CXCL6P80162 114 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ZNF33AQ06730 810 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 RCAN2Q14206 197 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 PRR4Q16378 134 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 KRT71Q3SY84 523 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 ZC2HC1BQ5TFG8 222 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 TMIGD1Q6UXZ0 262 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 FAM122BQ7Z309 247 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 TMEM135Q86UB9 458 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 SYCE1Q8N0S2 351 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 WDSUB1Q8N9V3 476 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 OR10G3Q8NGC4 313 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 OR56A4Q8NGH8 313 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 OR5K2Q8NHB8 316 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 NDNFQ8TB73 568 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 RARRES2Q99969 163 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 APOL2Q9BQE5 337 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 GNB4Q9HAV0 340 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 KPTNQ9Y664 436 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 GMEB1Q9Y692 573 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 UBN2Q6ZU65 1347 aa4.45□□□□□ -1.7
SCFD1-208ENST00000553278 GLYATL1P3A0A0U1RQE8 302 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 RBMY1BA6NDE4 496 aaKnown RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 RBMY1EA6NEQ0 496 aaKnown RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 ZBTB5O15062 677 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 CETN3O15182 167 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 CD160O95971 181 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 KRT16P08779 473 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 RBMY1DP0C7P1 496 aaKnown RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 RNF224P0DH78 156 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 RBMY1A1P0DJD3 496 aaKnown RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 NR2C1P13056 603 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 PMCHP20382 165 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 NPBWR2P48146 333 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 STXBP1P61764 594 aaKnown RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 PDIA2Q13087 525 aaKnown RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 KRTAP24-1Q3LI83 254 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 VAX1Q5SQQ9 334 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 GPR157Q5UAW9 335 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 C1orf146Q5VVC0 180 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 TFAP2EQ6VUC0 442 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 PRSS41Q7RTY9 318 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 ZBED8Q8IZ13 594 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 ST13P4Q8IZP2 240 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 PRELID2Q8N945 189 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 ACOT11Q8WXI4 607 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 RASL10AQ92737 203 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 FGF14Q92915 247 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 RANBP9Q96S59 729 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 KCNS3Q9BQ31 491 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 HES7Q9BYE0 225 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 C20orf85Q9H1P6 137 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 BEX1Q9HBH7 125 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 DMAP1Q9NPF5 467 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 TXLNGQ9NUQ3 528 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 KIF25Q9UIL4 384 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 BTNL2Q9UIR0 455 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 UGT2A1Q9Y4X1 527 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 CDH10Q9Y6N8 788 aa4.44□□□□□ -1.7
SCFD1-208ENST00000553278 TDRD15B5MCY1 1934 aaKnown RBP4.44□□□□□ -1.7
SCFD1-208ENST00000553278 PHF3Q92576 2039 aaKnown RBP4.43□□□□□ -1.7
SCFD1-208ENST00000553278 IGLV8-61A0A075B6I0 122 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms