RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ASB10Q8WXI3 467 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 ACOT11Q8WXI4 607 aaPredicted RBP16.76■□□□□ 0.27
PTCH1-227ENST00000553256 BPIFA2Q96DR5 249 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 KATNB1Q9BVA0 655 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 ANKRD19PQ9H560 264 aa16.76■□□□□ 0.27
PTCH1-227ENST00000553256 NMNAT1Q9HAN9 279 aaPredicted RBP16.76■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF726A6NNF4 738 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 CENPBD1B2RD01 187 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 BLOC1S5-TXNDC5H3BN57 136 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 ARHGEF9O43307 516 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 SERPINI2O75830 405 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 OR6A2O95222 327 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 F13BP05160 661 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 CSNK1A1P48729 337 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 VLDLRP98155 873 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 NAAAQ02083 359 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 HGFACQ04756 655 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 LAPTM4AQ15012 233 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF544Q6NX49 715 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 TBPL2Q6SJ96 375 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 MBOAT2Q6ZWT7 520 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 CCDC36Q8IYA8 594 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 RNF113BQ8IZP6 322 aaKnown RBP16.75■□□□□ 0.27
PTCH1-227ENST00000553256 FGFBP3Q8TAT2 258 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 FAM162AQ96A26 154 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 COX4I2Q96KJ9 171 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 CDRT15Q96T59 188 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 ULBP2Q9BZM5 246 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 ADA2Q9NZK5 511 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 RPS6KA6Q9UK32 745 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 MOKQ9UQ07 419 aa16.75■□□□□ 0.27
PTCH1-227ENST00000553256 HEATR1Q9H583 2144 aaKnown RBP16.75■□□□□ 0.27
PTCH1-227ENST00000553256 A0A1W2PRQ8 180 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 CDC42EP2O14613 210 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 NDUFS7O75251 213 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 IGHV4-39P01824 125 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 IGHMP01871 453 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 HIST1H2ABP04908 130 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 UMPSP11172 480 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 IFI30P13284 250 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 MSX2P35548 267 aaPredicted RBP16.74■□□□□ 0.27
PTCH1-227ENST00000553256 CDKN1AP38936 164 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 UBE2NP61088 152 aaKnown RBP16.74■□□□□ 0.27
PTCH1-227ENST00000553256 DGCR6Q14129 220 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 SWI5Q1ZZU3 235 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 SPATS1Q496A3 300 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 KLHL24Q6TFL4 600 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 TMPRSS11FQ6ZWK6 438 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 HIST3H2AQ7L7L0 130 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 MDP1Q86V88 176 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 MEX3DQ86XN8 651 aaKnown RBP16.74■□□□□ 0.27
PTCH1-227ENST00000553256 HIST1H2ACQ93077 130 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF566Q969W8 418 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 FOXB1Q99853 325 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 FNDC11Q9BVV2 318 aa16.74■□□□□ 0.27
PTCH1-227ENST00000553256 MOV10Q9HCE1 1003 aaKnown RBP16.74■□□□□ 0.27
PTCH1-227ENST00000553256 NSD1Q96L73 2696 aaPredicted RBP16.74■□□□□ 0.27
PTCH1-227ENST00000553256 NIPBLQ6KC79 2804 aaeCLIP16.73■□□□□ 0.27
PTCH1-227ENST00000553256 TRMUO75648 421 aaKnown RBP16.73■□□□□ 0.27
PTCH1-227ENST00000553256 BCL10O95999 233 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 HLA-HP01893 362 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF14P17017 642 aaPredicted RBP16.73■□□□□ 0.27
PTCH1-227ENST00000553256 LIMS1P48059 325 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 SAMD4BQ5PRF9 694 aaKnown RBP16.73■□□□□ 0.27
PTCH1-227ENST00000553256 C10orf128Q5T292 105 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF813Q6ZN06 617 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 FKBP9P1Q75LS8 142 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 DEFB107AQ8IZN7 70 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 MUC15Q8N387 334 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 OR6N1Q8NGY5 312 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 HDAC2Q92769 488 aaKnown RBP16.73■□□□□ 0.27
PTCH1-227ENST00000553256 MCHR2Q969V1 340 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 Q96MF0 132 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF347Q96SE7 839 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 KCNK17Q96T54 332 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 GSX1Q9H4S2 264 aaPredicted RBP16.73■□□□□ 0.27
PTCH1-227ENST00000553256 INIPQ9NRY2 104 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 CBLN4Q9NTU7 201 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 TMEM38BQ9NVV0 291 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 SAMD4AQ9UPU9 718 aaKnown RBP16.73■□□□□ 0.27
PTCH1-227ENST00000553256 CSPG4Q6UVK1 2322 aa16.73■□□□□ 0.27
PTCH1-227ENST00000553256 C2CD3Q4AC94 2353 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 IGKV1D-43A0A0B4J1Z2 117 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 TRIM64A6NGJ6 449 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 TRIM64BA6NI03 449 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 ARPC2O15144 300 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 DHHO43323 396 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 PTP4A3O75365 173 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 B4GALT1P15291 398 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 ACADSP16219 412 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 RHCEP18577 417 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 ARR3P36575 388 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 ATP5J2P56134 94 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 SEC23BQ15437 767 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 NRN1LQ496H8 165 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 PODNL1Q6PEZ8 512 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 PIWIL3Q7Z3Z3 882 aaKnown RBP16.72■□□□□ 0.27
PTCH1-227ENST00000553256 ZNF584Q8IVC4 421 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 SKA3Q8IX90 412 aa16.72■□□□□ 0.27
PTCH1-227ENST00000553256 NOXO1Q8NFA2 376 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms