RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 U3KQV3 271 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.53
NUP188-211ENST00000550219 TRAV36DV7A0A075B6V5 113 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 DNPH1O43598 174 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 CRLF1O75462 422 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 CD8AP01732 235 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 ITGA5P08648 1049 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 IMPDH2P12268 514 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 NTF4P34130 210 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 OMPP47874 163 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 PRKCDQ05655 676 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 C1orf140Q5VVS0 124 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 B3GLCTQ6Y288 498 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 DTX2Q86UW9 622 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 SVOPLQ8N434 492 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 OR4K5Q8NGD3 323 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 PFN4Q8NHR9 129 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 RNF217Q8TC41 542 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 LIPHQ8WWY8 451 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 YAE1D1Q9NRH1 226 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 NKX1-2Q9UD57 310 aaPredicted RBP11.76□□□□□ -0.53
NUP188-211ENST00000550219 MALT1Q9UDY8 824 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 B3GALT5Q9Y2C3 310 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 SLC25A15Q9Y619 301 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 FREM1Q5H8C1 2179 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 ROS1P08922 2347 aa11.76□□□□□ -0.53
NUP188-211ENST00000550219 FTCDNL1E5RQL4 147 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 E7EQL1 145 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 E2F6O75461 281 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 CCNB2O95067 398 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 BAG2O95816 211 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 BGLAPP02818 100 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 CD40P25942 277 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 SLC16A1P53985 500 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 SLC35A1P78382 337 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 GABRA6Q16445 453 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 FAM69AQ5T7M9 428 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 C1orf94Q6P1W5 598 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 PGBD2Q6P3X8 592 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 SSX8Q7RTT4 187 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 ZER1Q7Z7L7 766 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 HIPK1Q86Z02 1210 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 ZDHHC13Q8IUH4 622 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 NRMQ8IXM6 262 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 FBXL14Q8N1E6 418 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 MFSD8Q8NHS3 518 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 GIPC3Q8TF64 312 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 TAAR8Q969N4 342 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 KTI12Q96EK9 354 aaPredicted RBP11.75□□□□□ -0.53
NUP188-211ENST00000550219 RADILQ96JH8 1075 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 ADAD1Q96M93 576 aaKnown RBP11.75□□□□□ -0.53
NUP188-211ENST00000550219 NAA11Q9BSU3 229 aaPredicted RBP11.75□□□□□ -0.53
NUP188-211ENST00000550219 SEMA6AQ9H2E6 1030 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 MGAT4BQ9UQ53 548 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 TRAPPC4Q9Y296 219 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 ATP23Q9Y6H3 246 aa11.75□□□□□ -0.53
NUP188-211ENST00000550219 HIVEP2P31629 2446 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 LIPT2A6NK58 231 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 G3V2T6 193 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 CASQ2O14958 399 aaPredicted RBP11.74□□□□□ -0.53
NUP188-211ENST00000550219 OR2T1O43869 369 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 PIP5K1CO60331 668 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 OR10H3O60404 316 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 AHSA1O95433 338 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 ATP6V1G2O95670 118 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 MT-ATP6P00846 226 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 CDH2P19022 906 aaPredicted RBP11.74□□□□□ -0.53
NUP188-211ENST00000550219 MAKP20794 623 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 CBLP22681 906 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 PTAFRP25105 342 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 TTKP33981 857 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 IFNGR2P38484 337 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 GSSP48637 474 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 FABP6P51161 128 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 ARHGDIAP52565 204 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 LAPTM4AQ15012 233 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 OR7A5Q15622 319 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 ZNF74Q16587 644 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 OTUD3Q5T2D3 398 aaPredicted RBP11.74□□□□□ -0.53
NUP188-211ENST00000550219 TSPO2Q5TGU0 170 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 KLHL24Q6TFL4 600 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 SLC46A3Q7Z3Q1 461 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 EPHX4Q8IUS5 362 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 HS3ST5Q8IZT8 346 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 DEPDC4Q8N2C3 294 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 MUC15Q8N387 334 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 OR10G2Q8NGC3 310 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 OR9Q2Q8NGE9 314 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 BPIFA2Q96DR5 249 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 SGTBQ96EQ0 304 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 GPA33Q99795 319 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 DHRS9Q9BPW9 319 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 RHNO1Q9BSD3 238 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 OSBPL10Q9BXB5 764 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms