RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 OR5T3Q8NGG3 340 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 OR2G2Q8NGZ5 317 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 OR14C36Q8NHC7 312 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 OR1E3Q8WZA6 343 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 FAM3CQ92520 227 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 POTEKPQ9BYX7 375 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 WDR76Q9H967 626 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 Q9N2J8 555 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 IGKV1D-42A0A075B6H8 117 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 TRAV8-7A0A075B6U6 113 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 BLACEA4D250 179 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 C2orf74A8MZ97 194 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 GNB5O14775 395 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 SCAMP1O15126 338 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 SIX6O95475 246 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CD8AP01732 235 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 FCARP24071 287 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 PRSS3P35030 304 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 SRSF4Q08170 494 aaKnown RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 ZNF74Q16587 644 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 DCAF12L2Q5VW00 463 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 C11orf88Q6PI97 169 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 DGAT2L6Q6ZPD8 337 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 NUP54Q7Z3B4 507 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CSNK1A1LQ8N752 337 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ZNF676Q8N7Q3 588 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ZNF511Q8NB15 262 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CLEC1AQ8NC01 280 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 LSM14AQ8ND56 463 aaKnown RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 PXT1Q8NFP0 134 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 OR51S1Q8NGJ8 323 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 OR10Z1Q8NGY1 313 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 FGF13Q92913 245 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 TMEM106AQ96A25 262 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 MRPS24Q96EL2 167 aaKnown RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 WDR92Q96MX6 357 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 SLC25A21Q9BQT8 299 aaPredicted RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 EXO5Q9H790 373 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 TMEM138Q9NPI0 162 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 GDE1Q9NZC3 331 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ZNF107Q9UII5 783 aaPredicted RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 GPR160Q9UJ42 338 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 LAMP5Q9UJQ1 280 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 LOC100289279A0A1B0GTE1 492 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ELOA3DA6NLF2 546 aaPredicted RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 MPTX1A8MV57 137 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 SLC17A2O00624 439 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CDC123O75794 336 aaPredicted RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 PROS1P07225 676 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ACTR1BP42025 376 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 TAS2R19P59542 299 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ACTR1AP61163 376 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CCINQ13939 588 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 TCEA2Q15560 299 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 RAB11BQ15907 218 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.95□□□□□ -1.14
TDP1-204ENST00000545686 ITPRIPL2Q3MIP1 535 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ELOA3BQ3SY89 546 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 GXYLT1Q4G148 440 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 C4orf46Q504U0 113 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ALG10Q5BKT4 473 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CLVS2Q5SYC1 327 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 NKAIN2Q5VXU1 208 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 STEAP1BQ6NZ63 245 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 NPSR1Q6W5P4 371 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 TMEM17Q86X19 198 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 ELOA3Q8NG57 546 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 OR4N2Q8NGD1 307 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 OR5T2Q8NGG2 359 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 OR10G6Q8NH81 332 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 GPX8Q8TED1 209 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 FBXW5Q969U6 566 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 SLC38A3Q99624 504 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 MS4A7Q9GZW8 240 aaPredicted RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 FBRSQ9HAH7 460 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 SCPEP1Q9HB40 452 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 IFT46Q9NQC8 304 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 RASL12Q9NYN1 266 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 WSB2Q9NYS7 404 aaPredicted RBP7.95□□□□□ -1.14
TDP1-204ENST00000545686 FBXL2Q9UKC9 423 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 HRH3Q9Y5N1 445 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 CPAMD8Q8IZJ3 1885 aa7.95□□□□□ -1.14
TDP1-204ENST00000545686 A0A087WV48 116 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 A0A0J9YY10 115 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 TCRBV16S1A1N1A0A5B0 115 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 OR6C74A6NCV1 312 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 GRXCR1A8MXD5 290 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 C5orf67F2Z3F1 127 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 LGALS8O00214 317 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ABCD4O14678 606 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 APBB3O95704 486 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 WNT11O96014 354 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 RLN2P04090 185 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 MAS1P04201 325 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ICAM2P13598 275 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ALOX5APP20292 161 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 RAB3AP20336 220 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 ADH7P40394 386 aa7.94□□□□□ -1.14
TDP1-204ENST00000545686 AQP2P41181 271 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms