RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ZNF232Q9UNY5 417 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 IFT52Q9Y366 437 aa12.47□□□□□ -0.41
RTN3-214ENST00000545432 TRAV36DV7A0A075B6V5 113 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 A0A087WUJ7 227 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 A0A0G2JPF8 293 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 HNRNPCL2B2RXH8 293 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 HNRNPCL3B7ZW38 293 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 TRAPPC2LH3BP13 241 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 ZNF500O60304 480 aaPredicted RBP12.46□□□□□ -0.41
RTN3-214ENST00000545432 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.41
RTN3-214ENST00000545432 HNRNPCL4P0DMR1 293 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 MDKP21741 143 aaPredicted RBP12.46□□□□□ -0.41
RTN3-214ENST00000545432 LSP1P33241 339 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 CRISP3P54108 245 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 UCP2P55851 309 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 LCN2P80188 198 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 ZNF154Q13106 437 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 ALKBH6Q3KRA9 238 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 C16orf87Q6PH81 154 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 WDR88Q6ZMY6 472 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 EPS8L3Q8TE67 593 aaKnown RBP12.46□□□□□ -0.41
RTN3-214ENST00000545432 SNX33Q8WV41 574 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 C11orf40Q8WZ69 217 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 TMEM54Q969K7 222 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 TMIGD2Q96BF3 282 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 ELMOD3Q96FG2 381 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 PANX1Q96RD7 426 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 CITED1Q99966 193 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 BCL2L14Q9BZR8 327 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 C1orf198Q9H425 327 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 ARMC7Q9H6L4 198 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 PDP1Q9P0J1 537 aaPredicted RBP12.46□□□□□ -0.41
RTN3-214ENST00000545432 KLHL14Q9P2G3 628 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 P2RX2Q9UBL9 471 aa12.46□□□□□ -0.41
RTN3-214ENST00000545432 A8MXK9 166 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 TM9SF1O15321 606 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 KRT75O95678 551 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 BGLAPP02818 100 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 BPGMP07738 259 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 PATE4P0C8F1 98 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 PPIAL4GP0DN37 164 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 IL12AP29459 219 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 ETV4P43268 484 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 MMP15P51511 669 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 ERVS71-1P61550 626 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 CARD17Q5XLA6 110 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 OGFOD2Q6N063 350 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 ZNF621Q6ZSS3 439 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 RHOUQ7L0Q8 258 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 PXKQ7Z7A4 578 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 DPPA2Q7Z7J5 298 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 SLC22A24Q8N4F4 322 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 EIF1ADQ8N9N8 165 aaKnown RBP12.45□□□□□ -0.42
RTN3-214ENST00000545432 GLB1L3Q8NCI6 653 aaPredicted RBP12.45□□□□□ -0.42
RTN3-214ENST00000545432 SLC30A7Q8NEW0 376 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 TCP10LQ8TDR4 215 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 TRIM44Q96DX7 344 aaPredicted RBP12.45□□□□□ -0.42
RTN3-214ENST00000545432 GAL3ST1Q99999 423 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 ULBP2Q9BZM5 246 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 SAP30LQ9HAJ7 183 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 BCL2L10Q9HD36 194 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 SLC6A13Q9NSD5 602 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 DECR2Q9NUI1 292 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 HAO1Q9UJM8 370 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.45□□□□□ -0.42
RTN3-214ENST00000545432 INSIG2Q9Y5U4 225 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 GPR45Q9Y5Y3 372 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 AUP1Q9Y679 476 aa12.45□□□□□ -0.42
RTN3-214ENST00000545432 ENTPD5O75356 428 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 IGHMP01871 453 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 ZCCHC18P0CG32 403 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 MAKP20794 623 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 HOXC5Q00444 222 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 PAX8Q06710 450 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 SLC3A1Q07837 685 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 NRN1LQ496H8 165 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 PDCD4Q53EL6 469 aaKnown RBP12.44□□□□□ -0.42
RTN3-214ENST00000545432 FBLN7Q53RD9 439 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 ZNF362Q5T0B9 420 aaPredicted RBP12.44□□□□□ -0.42
RTN3-214ENST00000545432 LRFN4Q6PJG9 635 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 BHLHE22Q8NFJ8 381 aaPredicted RBP12.44□□□□□ -0.42
RTN3-214ENST00000545432 WFDC12Q8WWY7 111 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 GTF3AQ92664 365 aaKnown RBP12.44□□□□□ -0.42
RTN3-214ENST00000545432 TAF15Q92804 592 aaKnown RBP eCLIP12.44□□□□□ -0.42
RTN3-214ENST00000545432 MMP27Q9H306 513 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 MRPL39Q9NYK5 338 aaKnown RBP12.44□□□□□ -0.42
RTN3-214ENST00000545432 TESQ9UGI8 421 aaKnown RBP12.44□□□□□ -0.42
RTN3-214ENST00000545432 KLHL21Q9UJP4 597 aa12.44□□□□□ -0.42
RTN3-214ENST00000545432 KMT2CQ8NEZ4 4911 aaKnown RBP12.43□□□□□ -0.42
RTN3-214ENST00000545432 A0A1B0GWA3 101 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 PLPP3O14495 311 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 ITM2AO43736 263 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 IGHV1-46P01743 117 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 IGHV2-70P01814 119 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 BCHEP06276 602 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 CD55P08174 381 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 OR8G3PP0DMU2 310 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 ETFAP13804 333 aa12.43□□□□□ -0.42
RTN3-214ENST00000545432 LBPP18428 481 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms